Evidence map›Paper›PMID 25165004›Full record

ArticleJournal of biochemical and molecular toxicology2014

Minimal detection of nuclear mutations in XP-V and normal cells treated with oxidative stress inducing agents.

Kimberly N Herman, Shannon Toffton, Scott D McCulloch

Open access · greenAbstract read
In one paragraph

Article in Journal of biochemical and molecular toxicology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 95% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kimberly N HermanEnvironmental and Molecular Toxicology Program, Department of Biological Sciences, North Carolina State University, Raleigh, NC, 27695, USA. scott_mcculloch@ncsu.edu.
Shannon Toffton
Scott D McCulloch
North Carolina State University · US

Funding

UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
TRAINING IN BIOCHEMICAL AND ENVIRONMENTAL TOXICOLOGYT32ES007046 · NIEHS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI Seth William Kullman · 1985 to 2026
$5.1M
The role of human DNA polymerase eta in the mutagenic response to oxidative stresR01ES016942 · NIEHS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI MCCULLOCH, SCOTT DAVID · 2009 to 2013
$1.6M
NIEHS NIH HHS P30 ES010126NIEHS NIH HHS P30-ES10126NIEHS NIH HHS R01 ES016942NIEHS NIH HHS T32 ES007046
6 · The paper itself

Abstract

Elevated levels of reactive oxygen species (ROS) can be induced by exposure to various chemicals and radiation. One type of damage in DNA produced by ROS is modification of guanine to 7,8-dihydro-8-oxoguanine (8-oxoG). This particular alteration to the chemistry of the base can inhibit the replication fork and has been linked to mutagenesis, cancer, and aging. In vitro studies have shown that the translesion synthesis polymerase, DNA polymerase η (pol η), is able to efficiently bypass 8-oxoG in DNA. In this study, we wanted to investigate the mutagenic effects of oxidative stress, and in particular 8-oxoG, in the presence and absence of pol η. We quantified levels of oxidative stress, 8-oxoG levels in DNA, and nuclear mutation rates. We found that most of the 8-oxoG detected were localized to the mitochondrial DNA, opposed to the nuclear DNA. We also saw a corresponding lack of mutations in a nuclear-encoded gene. This suggests that oxidative stress' primary mutagenic effects are not predominantly on genomic DNA.

Indexed as

DNA Damage8-Hydroxy-2'-DeoxyguanosineDeoxyguanosineDNA-Directed DNA PolymeraseDNA, MitochondrialDNA Mutational AnalysisHumansOxidative StressReactive Oxygen SpeciesY-Family DNA Polymerases8-Hydroxy-2'-DeoxyguanosineDeoxyguanosineDNA-Directed DNA PolymeraseDNA, MitochondrialRad30 proteinReactive Oxygen SpeciesY-Family DNA PolymerasesDNA damageDNA polymerase ηmutagenesisoxidative stresstranslesion synthesis

Identifiers

PMID25165004
PMCPMC4257877
OpenAlexW1894532547

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.