Evidence map›Paper›PMID 25164820›Full record

ArticleThe Journal of biological chemistry2014

Identification of a misfolded region in superoxide dismutase 1 that is exposed in amyotrophic lateral sclerosis.

Melissa S Rotunno, Jared R Auclair, Stephanie Maniatis, Scott A Shaffer, Jeffrey Agar, Daryl A Bosco

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Melissa S RotunnoFrom the Department of Neurology, University of Massachusetts Medical School, Worcester, Massachusetts 01605.
Jared R Auclairthe Department of Chemistry and Chemical Biology, Northeastern University, Boston, Massachusetts 02115.
Stephanie Maniatisthe Proteomics and Mass Spectrometry Facility, University of Massachusetts Medical School, Shrewsbury, Massachusetts 01545, and.
Scott A Shafferthe Proteomics and Mass Spectrometry Facility, University of Massachusetts Medical School, Shrewsbury, Massachusetts 01545, and the Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, Massachusetts 01605.
Jeffrey Agarthe Department of Chemistry and Chemical Biology, Northeastern University, Boston, Massachusetts 02115.
Daryl A BoscoFrom the Department of Neurology, University of Massachusetts Medical School, Worcester, Massachusetts 01605, the Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, Massachusetts 01605 Daryl.Bosco@umassmed.edu.
University of Massachusetts Chan Medical School · USNortheastern University · US

Funding

Structural Consequences of ALS-related Modifications of SOD1R01NS065263 · NINDS · NORTHEASTERN UNIVERSITY · PI AGAR, JEFFREY NEIL · 2009 to 2013
$1.7M
Investigation of post-translational modifications in WT SOD1 in sporadic ALSR01NS067206 · NINDS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BOSCO, DARYL ANGELA · 2010 to 2013
$1.4M
NINDS NIH HHS R01 NS067206NINDS NIH HHS R01NS067206
6 · The paper itself

Abstract

Mutations and aberrant post-translational modifications within Cu,Zn-superoxide dismutase (SOD1) cause this otherwise protective enzyme to misfold, leading to amyotrophic lateral sclerosis (ALS). The C4F6 antibody selectively binds misfolded SOD1 in spinal cord tissues from postmortem human ALS cases, as well as from an ALS-SOD1 mouse model, suggesting that the C4F6 epitope reports on a pathogenic conformation that is common to misfolded SOD1 variants. To date, the residues and structural elements that comprise this epitope have not been elucidated. Using a chemical cross-linking and mass spectrometry approach, we identified the C4F6 epitope within several ALS-linked SOD1 variants, as well as an oxidized form of WT SOD1, supporting the notion that a similar misfolded conformation is shared among pathological SOD1 proteins. Exposure of the C4F6 epitope was modulated by the SOD1 electrostatic (loop VII) and zinc binding (loop IV) loops and correlated with SOD1-induced toxicity in a primary microglia activation assay. Site-directed mutagenesis revealed Asp(92) and Asp(96) as key residues within the C4F6 epitope required for the SOD1-C4F6 binding interaction. We propose that stabilizing the functional loops within SOD1 and/or obscuring the C4F6 epitope are viable therapeutic strategies for treating SOD1-mediated ALS.

Indexed as

Amyotrophic Lateral SclerosisAnimalsAntibodies, MonoclonalEpitopesEscherichia coliGene ExpressionHumansHybridomasIsoenzymesMiceMicrogliaMutagenesis, Site-DirectedMutationOxidation-ReductionPrimary Cell CultureProtein BindingAntibodies, MonoclonalEpitopesIsoenzymesRecombinant ProteinsSOD1 protein, humanSod1 protein, mouseSuperoxide DismutaseSuperoxide Dismutase-1Amyotrophic Lateral Sclerosis (ALS) (Lou Gehrig Disease)MicrogliaNeurodegenerative DiseaseProtein Cross-linkingProtein MisfoldingSuperoxide Dismutase (SOD)

Identifiers

PMID25164820
PMCPMC4192504
OpenAlexW2045479131

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.