Evidence map›Paper›PMID 25164438›Full record

ArticleAnnals of neurology2014

De novo KCNB1 mutations in epileptic encephalopathy.

Ali Torkamani, Kevin Bersell, Benjamin S Jorge, Robert L Bjork, Jennifer R Friedman, Cinnamon S Bloss, Julie Cohen, Siddharth Gupta, Sakkubai Naidu, Carlos G Vanoye and 2 more

Open access · greenAbstract read
In one paragraph

Article in Annals of neurology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed, 1 pooled it
8.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 1 synthesis or guideline pooled it, 145 citations in OpenAlex.

  1. Pooled it
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  7. Article
  8. A conifer metabolite corrects episodic ataxia type 1 by voltage sensor-mediated ligand activation of Kv1.1.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Kv2.1 negatively regulates Reissner fiber development.Frontiers in cell and developmental biology · 2025
    Article
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  17. A novel autism-associatedFrontiers in cellular neuroscience · 2024
    Article
  18. Review
  19. Article
  20. Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 1 country.

Ali Torkamani *The Scripps Translational Science Institute, Scripps Health and The Scripps Research Institute, San Diego, CA 92037.
Kevin Bersell *Department of Pharmacology, Vanderbilt University, Nashville, TN 37232, USA.
Benjamin S Jorge *Vanderbilt Brain Institute, Vanderbilt University, Nashville, TN 37232, USA.
Robert L BjorkPediatrics, Scripps Health, San Diego, CA 92037, USA.
Jennifer R FriedmanDepartments of Neurosciences and Pediatrics, University of California, San Diego, San Diego, CA 92093, USA.
Cinnamon S BlossThe Scripps Translational Science Institute, Scripps Health and The Scripps Research Institute, San Diego, CA 92037.
Julie CohenKennedy Krieger Institute, Baltimore, MD 21205.
Siddharth GuptaKennedy Krieger Institute, Baltimore, MD 21205.
Sakkubai NaiduKennedy Krieger Institute, Baltimore, MD 21205.
Carlos G VanoyeDepartment of Medicine, Vanderbilt University, Nashville, TN 37232, USA.
Alfred L GeorgeDepartment of Pharmacology, Vanderbilt University, Nashville, TN 37232, USA.
Jennifer A KearneyDepartment of Medicine, Vanderbilt University, Nashville, TN 37232, USA.
Northwestern University · USKennedy Krieger Institute · USScripps Health · USVanderbilt University · USJohns Hopkins University · USScripps Research Institute · USUniversity of California, San Diego · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007347 · NIGMS · VANDERBILT UNIVERSITY · PI WILLIAMS, CHRISTOPHER S. · 1985 to 2023
$26.3M
SCRIPPS TRANSLATIONAL SCIENCE INSTITUTE (UL1)UL1RR025774 · NCRR · SCRIPPS RESEARCH INSTITUTE, THE · PI TOPOL, ERIC JEFFREY · 2008 to 2011
$16.3M
Combined Approach to the Genetic Basis of EpilepsyR01NS053792 · NINDS · VANDERBILT UNIVERSITY · PI KEARNEY, JENNIFER A · 2006 to 2019
$4.7M
HEREDITARY DEFECTS IN HUMAN SODIUM CHANNELSR01NS032387 · NINDS · VANDERBILT UNIVERSITY · PI GEORGE, ALFRED L. · 1994 to 2015
$3.2M
Scripps Genome ADVISER: Annotation and Distributed Variant Interpretation SERverU01HG006476 · NHGRI · SCRIPPS HEALTH · PI TORKAMANI, ALI · 2012 to 2015
$1.1M
Molecular Regulation of an Epilepsy Modifier GeneF31NS083097 · NINDS · VANDERBILT UNIVERSITY · PI JORGE, BENJAMIN · 2013 to 2014
$39k
NCRR NIH HHS UL1 RR025774NHGRI NIH HHS U01 HG006476NIGMS NIH HHS T32 GM007347NINDS NIH HHS F31 NS083097NINDS NIH HHS R01 NS032387NINDS NIH HHS R01 NS053792
6 · The paper itself

Abstract

objectiveNumerous studies have demonstrated increased load of de novo copy number variants or single nucleotide variants in individuals with neurodevelopmental disorders, including epileptic encephalopathies, intellectual disability, and autism.

methodsWe searched for de novo mutations in a family quartet with a sporadic case of epileptic encephalopathy with no known etiology to determine the underlying cause using high-coverage whole exome sequencing (WES) and lower-coverage whole genome sequencing. Mutations in additional patients were identified by WES. The effect of mutations on protein function was assessed in a heterologous expression system.

resultsWe identified a de novo missense mutation in KCNB1 that encodes the KV 2.1 voltage-gated potassium channel. Functional studies demonstrated a deleterious effect of the mutation on KV 2.1 function leading to a loss of ion selectivity and gain of a depolarizing inward cation conductance. Subsequently, we identified 2 additional patients with epileptic encephalopathy and de novo KCNB1 missense mutations that cause a similar pattern of KV 2.1 dysfunction.

interpretationOur genetic and functional evidence demonstrate that KCNB1 mutation can result in early onset epileptic encephalopathy. This expands the locus heterogeneity associated with epileptic encephalopathies and suggests that clinical WES may be useful for diagnosis of epileptic encephalopathies of unknown etiology.

Indexed as

AnimalsBiotinylationChildChild, PreschoolCHO CellsCricetulusDevelopmental DisabilitiesEpilepsyFemaleGenetic Predisposition to DiseaseHumansMaleMembrane PotentialsMutation, MissensePatch-Clamp TechniquesPhenotypeKCNB1 protein, humanShab Potassium Channels

Identifiers

PMID25164438
PMCPMC4192091
OpenAlexW2120773704

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.