Evidence map›Paper›PMID 25162680›Full record

ArticlePloS one2014

Genetic analysis and QTL detection for resistance to white tip disease in rice.

Tong Zhou, Cunyi Gao, Linlin Du, Hui Feng, Lijiao Wang, Ying Lan, Feng Sun, Lihui Wei, Yongjian Fan, Wenbiao Shen and 1 more

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Tong ZhouInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Cunyi GaoInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, China; College of Life Science, Nanjing Agricultural University, Nanjing, China.
Linlin DuInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Hui FengInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Lijiao WangInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Ying LanInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Feng SunInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Lihui WeiInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Yongjian FanInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Wenbiao ShenCollege of Life Science, Nanjing Agricultural University, Nanjing, China.
Yijun ZhouInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The inheritance of resistance to white tip disease (WTDR) in rice (Oryza sativa L.) was analyzed with an artificial inoculation test in a segregating population derived from the cross between Tetep, a highly resistant variety that was identified in a previous study, and a susceptible cultivar. Three resistance-associated traits, including the number of Aphelenchoides besseyi (A. besseyi) individuals in 100 grains (NA), the loss rate of panicle weight (LRPW) and the loss rate of the total grains per panicle (LRGPP) were analyzed for the detection of the quantitative trait locus (QTL) in the population after construction of a genetic map. Six QTLs distributed on chromosomes 3, 5 and 9 were mapped. qNA3 and qNA9, conferring reproduction number of A. besseyi in the panicle, accounted for 16.91% and 12.54% of the total phenotypic variance, respectively. qDRPW5a and qDRPW5b, associated with yield loss, were located at two adjacent marker intervals on chromosome 5 and explained 14.15% and 14.59% of the total phenotypic variation and possessed LOD values of 3.40 and 3.39, respectively. qDRPW9 was considered as a minor QTL and only explained 1.02% of the phenotypic variation. qLRGPP5 contributed to the loss in the number of grains and explained 10.91% of the phenotypic variation. This study provides useful information for the breeding of resistant cultivars against white tip disease in rice.

Indexed as

Quantitative Trait LociAnimalsChimeraChromosome MappingChromosomes, PlantCrosses, GeneticGenotypeNematodaOryzaPhenotypePlant DiseasesPlant Immunity

Identifiers

PMID25162680
PMCPMC4146579

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.