Evidence map›Paper›PMID 25162036›Full record

ArticleBioMed research international2014

Proteomics and metabolomics for in situ monitoring of wound healing.

Stefan Kalkhof, Yvonne Förster, Johannes Schmidt, Matthias C Schulz, Sven Baumann, Anne Weißflog, Wenling Gao, Ute Hempel, Uwe Eckelt, Stefan Rammelt and 1 more

Abstract read
In one paragraph

Article in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Saudi journal of biological sciences · 2021
    Article
  7. Article
  8. A Neutrophil Proteomic Signature in Surgical Trauma Wounds.International journal of molecular sciences · 2018
    Article
  9. The gestational power of mast cells in the injured tissue.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2018
    Review
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Stefan KalkhofDepartment of Proteomics, Helmholtz-Centre for Environmental Research-UFZ, Permoserstraße 15, 04318 Leipzig, Germany.
Yvonne FörsterUniversity Center of Orthopedics and Trauma Surgery, University Hospital "Carl Gustav Carus", TU Dresden, Fetscherstraße 74, 01307 Dresden, Germany.
Johannes SchmidtDepartment of Proteomics, Helmholtz-Centre for Environmental Research-UFZ, Permoserstraße 15, 04318 Leipzig, Germany.
Matthias C SchulzDepartment of Oral and Maxillofacial Surgery, University Hospital "Carl Gustav Carus", TU Dresden, Fetscherstraße 74, 01307 Dresden, Germany.
Sven BaumannDepartment of Metabolomics, Helmholtz-Centre for Environmental Research-UFZ, Permoserstraße 15, 04318 Leipzig, Germany ; Institute of Pharmacy, Faculty of Biosciences, Pharmacy and Psychology, University of Leipzig, 04103 Leipzig, Germany.
Anne WeißflogDepartment of Oral and Maxillofacial Surgery, University Hospital "Carl Gustav Carus", TU Dresden, Fetscherstraße 74, 01307 Dresden, Germany.
Wenling GaoUniversity Center of Orthopedics and Trauma Surgery, University Hospital "Carl Gustav Carus", TU Dresden, Fetscherstraße 74, 01307 Dresden, Germany.
Ute HempelInstitute of Physiological Chemistry, TU Dresden, Fiedlerstraße 42, 01307 Dresden, Germany.
Uwe EckeltDepartment of Oral and Maxillofacial Surgery, University Hospital "Carl Gustav Carus", TU Dresden, Fetscherstraße 74, 01307 Dresden, Germany.
Stefan RammeltUniversity Center of Orthopedics and Trauma Surgery, University Hospital "Carl Gustav Carus", TU Dresden, Fetscherstraße 74, 01307 Dresden, Germany.
Martin von BergenDepartment of Proteomics, Helmholtz-Centre for Environmental Research-UFZ, Permoserstraße 15, 04318 Leipzig, Germany ; Department of Metabolomics, Helmholtz-Centre for Environmental Research-UFZ, Permoserstraße 15, 04318 Leipzig, Germany ; Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University, Sohngaardsholmsvej 49, 9000 Aalborg, Denmark.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Wound healing of soft tissue and bone defects is a complex process in which cellular differentiation and adaption are regulated by internal and external factors, among them are many different proteins. In contrast to insights into the significance of various single proteins based on model systems, the knowledge about the processes at the actual site of wound healing is still limited. This is caused by a general lack of methods that allow sampling of extracellular factors, metabolites, and proteins in situ. Sampling of wound fluids in combination with proteomics and metabolomics is one of the promising approaches to gain comprehensive and time resolved data on effector molecules. Here, we describe an approach to sample metabolites by microdialysis and to extract proteins simultaneously by adsorption. With this approach it is possible (i) to collect, enrich, and purify proteins for a comprehensive proteome analysis; (ii) to detect more than 600 proteins in different defects including more than 100 secreted proteins, of which many proteins have previously been demonstrated to have diagnostic or predictive power for the wound healing state; and (iii) to combine continuous sampling of cytokines and metabolites and discontinuous sampling of larger proteins to gain complementary information of the same defect.

Indexed as

MetabolomicsProtein BiosynthesisProteomicsAnimalsBone RegenerationCathetersGene Expression RegulationHumansMicrodialysisRatsWound Healing

Identifiers

PMID25162036
PMCPMC4137721

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.