Evidence map›Paper›PMID 25161706›Full record

ArticleBeilstein journal of organic chemistry2014

Pyrene-modified PNAs: Stacking interactions and selective excimer emission in PNA2DNA triplexes.

Alex Manicardi, Lucia Guidi, Alice Ghidini, Roberto Corradini

Abstract read
In one paragraph

Article in Beilstein journal of organic chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Fluorogenic PNA probes.Beilstein journal of organic chemistry · 2018
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Alex ManicardiDepartment of Chemistry, University of Parma, Parco Area delle Scienze 17/A, 43124, Parma, Italy. ; Tel: +39 0521 905410.
Lucia GuidiDepartment of Chemistry, University of Parma, Parco Area delle Scienze 17/A, 43124, Parma, Italy. ; Tel: +39 0521 905410.
Alice GhidiniDepartment of Chemistry, University of Parma, Parco Area delle Scienze 17/A, 43124, Parma, Italy. ; Tel: +39 0521 905410 ; Present Address: Department of Biosciences and Nutrition, Karolinska Institutet, Novum, Hälsovägen 7, 14183, Huddinge, Sweden.
Roberto CorradiniDepartment of Chemistry, University of Parma, Parco Area delle Scienze 17/A, 43124, Parma, Italy. ; Tel: +39 0521 905410.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pyrene derivatives can be incorporated into nucleic acid analogs in order to obtain switchable probes or supramolecular architectures. In this paper, peptide nucleic acids (PNAs) containing 1 to 3 1-pyreneacetic acid units (PNA1-6) with a sequence with prevalence of pyrimidine bases, complementary to cystic fibrosis W1282X point mutation were synthesized. These compounds showed sequence-selective switch-on of pyrene excimer emission in the presence of target DNA, due to PNA2DNA triplex formation, with stability depending on the number and positioning of the pyrene units along the chain. An increase in triplex stability and a very high mismatch-selectivity, derived from combined stacking and base-pairing interactions, were found for PNA2, bearing two distant pyrene units.

Indexed as

modified nucleobasenucleic acidsPNApyrene excimerSNP recognitiontriplex stabilization

Identifiers

PMID25161706
PMCPMC4142857

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.