Evidence map›Paper›PMID 25161194›Full record

ArticleeLife2014

Methylation of histone H3K23 blocks DNA damage in pericentric heterochromatin during meiosis.

Romeo Papazyan, Ekaterina Voronina, Jessica R Chapman, Teresa R Luperchio, Tonya M Gilbert, Elizabeth Meier, Samuel G Mackintosh, Jeffrey Shabanowitz, Alan J Tackett, Karen L Reddy and 4 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 67 citations in OpenAlex.

  1. Specific tracking of N-terminal clipping on histone H3 inMarine life science & technology · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Transcriptome analysis of the binucleate ciliateMolecular biology of the cell · 2023
    Article
  8. Article
  9. Review
  10. Targets of histone H3 lysine 9 methyltransferases.Frontiers in cell and developmental biology · 2022
    Review
  11. Article
  12. Article
  13. Programmed genome rearrangements in ciliates.Cellular and molecular life sciences : CMLS · 2020
    Review
  14. eLife · 2020
    Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Romeo PapazyanDepartment of Pharmacology and Molecular Sciences, The Johns Hopkins University School of Medicine, Baltimore, United States Center for Epigenetics, The Johns Hopkins University School of Medicine, Baltimore, United States.
Ekaterina VoroninaDepartment of Molecular Biology and Genetics, Howard Hughes Medical Institute, The Johns Hopkins University School of Medicine, Balitmore, United States Center for Cell Dynamics, The Johns Hopkins University School of Medicine, Baltimore, United States.
Jessica R ChapmanDepartment of Chemistry, University of Virginia, Charlottesville, United States.
Teresa R LuperchioCenter for Epigenetics, The Johns Hopkins University School of Medicine, Baltimore, United States Department of Biological Chemistry, The Johns Hopkins University School of Medicine, Baltimore, United States.
Tonya M GilbertDepartment of Pharmacology and Molecular Sciences, The Johns Hopkins University School of Medicine, Baltimore, United States Center for Epigenetics, The Johns Hopkins University School of Medicine, Baltimore, United States.
Elizabeth MeierDepartment of Pharmacology and Molecular Sciences, The Johns Hopkins University School of Medicine, Baltimore, United States Center for Epigenetics, The Johns Hopkins University School of Medicine, Baltimore, United States.
Samuel G MackintoshDepartment of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, Little Rock, United States.
Jeffrey ShabanowitzDepartment of Chemistry, University of Virginia, Charlottesville, United States.
Alan J TackettDepartment of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, Little Rock, United States.
Karen L ReddyCenter for Epigenetics, The Johns Hopkins University School of Medicine, Baltimore, United States Department of Biological Chemistry, The Johns Hopkins University School of Medicine, Baltimore, United States.
Robert S CoyneDepartment of Genomic Medicine, J. Craig Venter Institute, Rockville, United States.
Donald F HuntDepartment of Chemistry, University of Virginia, Charlottesville, United States Department of Pathology, University of Virginia, Charlottesville, United States.
Yifan LiuDepartment of Pathology, University of Michigan Medical School, Ann Arbor, United States.
Sean D TavernaDepartment of Pharmacology and Molecular Sciences, The Johns Hopkins University School of Medicine, Baltimore, United States Center for Epigenetics, The Johns Hopkins University School of Medicine, Baltimore, United States staverna@jhmi.edu.
Johns Hopkins University · USJohns Hopkins Medicine · USUniversity of Virginia · USUniversity of Arkansas for Medical Sciences · USJ. Craig Venter Institute · USUniversity of Michigan–Ann Arbor · US

Funding

Understanding Hesitant AdoptersP20GM103429 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI JERRY WARE · 2012 to 2026
$60.9M
TCP5: ACTIVE SITE LABELING REAGENT FOR ACETYLTRANSFERASESU54RR020839 · NCRR · JOHNS HOPKINS UNIVERSITY · PI BOEKE, JEF D · 2004 to 2011
$27.4M
BIOCHEMISTRY, CELLULAR AND MOLECULAR BIOLOGY PROGRAMT32GM007445 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI GREEN, RACHEL · 1985 to 2021
$24.1M
PROTEIN SEQUENCING BY TANDEM MASS SPECTROMETRYR01GM037537 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI HUNT, DONALD F · 1987 to 2023
$17.8M
Arkansas Center for Clinical and Translational ResearchUL1TR000039 · NCATS · UNIV OF ARKANSAS FOR MED SCIS · PI BECK, CORNELIA MARIE, JAMES, LAURA P · 2012 to 2014
$10.0M
Center for Protein Structure and FunctionP30GM103450 · NIGMS · UNIVERSITY OF ARKANSAS AT FAYETTEVILLE · PI MILLETT, FRANCIS S · 2012 to 2014
$3.2M
Polycomb-mediated heterochromatin formation in TetrahymenaR01GM087343 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LIU, YIFAN · 2010 to 2014
$1.4M
Using ChAP-MS to Study Macromolecular Chromatin Composition during TranscriptionR01GM106024 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI TACKETT, ALAN, TAVERNA, SEAN D. · 2013 to 2016
$1.2M
High-throughput Gene Knockout Production in Tetrahymena thermophilaR24GM089662 · NIGMS · J. CRAIG VENTER INSTITUTE, INC. · PI COYNE, ROBERT STEPHEN · 2010 to 2012
$1.1M
Components of C. elegans P-granules and regulation of their functionF32GM080923 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VORONINA, EKATERINA · 2007 to 2009
$165k
NCATS NIH HHS UL1 TR000039NCATS NIH HHS UL1TR000039NCRR NIH HHS U54 RR020839NIGMS NIH HHS 5F32GM080923NIGMS NIH HHS F32 GM080923NIGMS NIH HHS GM087343NIGMS NIH HHS GM089662NIGMS NIH HHS GM37537NIGMS NIH HHS P20 GM103429NIGMS NIH HHS P20GM103429NIGMS NIH HHS P30 GM103450NIGMS NIH HHS P30GM103450NIGMS NIH HHS R01 GM037537NIGMS NIH HHS R01 GM087343NIGMS NIH HHS R01 GM106024NIGMS NIH HHS R01GM106024NIGMS NIH HHS R24 GM089662NIGMS NIH HHS T32 GM007445
6 · The paper itself

Abstract

Despite the well-established role of heterochromatin in protecting chromosomal integrity during meiosis and mitosis, the contribution and extent of heterochromatic histone posttranslational modifications (PTMs) remain poorly defined. Here, we gained novel functional insight about heterochromatic PTMs by analyzing histone H3 purified from the heterochromatic germline micronucleus of the model organism Tetrahymena thermophila. Mass spectrometric sequencing of micronuclear H3 identified H3K23 trimethylation (H3K23me3), a previously uncharacterized PTM. H3K23me3 became particularly enriched during meiotic leptotene and zygotene in germline chromatin of Tetrahymena and C. elegans. Loss of H3K23me3 in Tetrahymena through deletion of the methyltransferase Ezl3p caused mislocalization of meiosis-induced DNA double-strand breaks (DSBs) to heterochromatin, and a decrease in progeny viability. These results show that an evolutionarily conserved developmental pathway regulates H3K23me3 during meiosis, and our studies in Tetrahymena suggest this pathway may function to protect heterochromatin from DSBs.

Indexed as

Protein Processing, Post-TranslationalAmino Acid SequenceDNA Breaks, Double-StrandedDNA, ProtozoanGene DeletionHeterochromatinHistone-Lysine N-MethyltransferaseHistonesMeiosisMethylationMicronucleus, GermlineMolecular Sequence DataProtozoan ProteinsSequence AlignmentTetrahymena thermophilaDNA, ProtozoanHeterochromatinHistone-Lysine N-MethyltransferaseHistonesProtozoan ProteinschromatinDNA damagehistonesmeiosismethylationTetrahymena thermophila

Identifiers

PMID25161194
PMCPMC4141274
OpenAlexW2170111375

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.