Evidence map›Paper›PMID 25161191›Full record

ArticlemBio2014

A nutrient-tunable bistable switch controls motility in Salmonella enterica serovar Typhimurium.

Santosh Koirala, Patrick Mears, Martin Sim, Ido Golding, Yann R Chemla, Phillip D Aldridge, Christopher V Rao

Open access · goldAbstract read
In one paragraph

Article in mBio, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 80 citations in OpenAlex.

  1. Article
  2. Review
  3. Regulator-derived growth and fitness costs ofbioRxiv : the preprint server for biology · 2026
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  11. mSystems · 2024
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  12. Article
  13. Evasion of toll-like receptor recognition byFrontiers in microbiology · 2023
    Article
  14. Analysis ofFrontiers in cellular and infection microbiology · 2023
    Review
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Santosh KoiralaDepartment of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Patrick MearsDepartment of Physics, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Martin Sim
Ido Golding
Yann R Chemla
Phillip D Aldridge
Christopher V RaoDepartment of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA chris@scs.uiuc.edu.
University of Illinois Urbana-Champaign · USNewcastle University · GBBaylor College of Medicine · US

Funding

CHEMOTACTIC SENSORY TRANSDUCTION IN BACILLUS SUBTILISR01GM054365 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI ORDAL, GEORGE W. · 1996 to 2012
$4.3M
GENE REGULATION IN PHAGE LAMBDA: A REAL-TIME STUDY WITH SINGLE-EVENT RESOLUTIONR01GM082837 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI GOLDING, IDO · 2008 to 2020
$4.0M
Multiscale analysis of neutrophil chemotaxis and signal integrationR01GM083601 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI RAO, CHRISTOPHER · 2007 to 2011
$1.4M
Biotechnology and Biological Sciences Research Council BB/D015855/1NIGMS NIH HHS R01 GM054365NIGMS NIH HHS R01 GM082837NIGMS NIH HHS R01 GM083601
6 · The paper itself

Abstract

unlabelledMany bacteria are motile only when nutrients are scarce. In contrast, Salmonella enterica serovar Typhimurium is motile only when nutrients are plentiful, suggesting that this bacterium uses motility for purposes other than foraging, most likely for host colonization. In this study, we investigated how nutrients affect motility in S. enterica and found that they tune the fraction of motile cells. In particular, we observed coexisting populations of motile and nonmotile cells, with the distribution being determined by the concentration of nutrients in the growth medium. Interestingly, S. enterica responds not to a single nutrient but apparently to a complex mixture of them. Using a combination of experimentation and mathematical modeling, we investigated the mechanism governing this behavior and found that it results from two antagonizing regulatory proteins, FliZ and YdiV. We also found that a positive feedback loop involving the alternate sigma factor FliA is required, although its role appears solely to amplify FliZ expression. We further demonstrate that the response is bistable: that is, genetically identical cells can exhibit different phenotypes under identical growth conditions. Together, these results uncover a new facet of the regulation of the flagellar genes in S. enterica and further demonstrate how bacteria employ phenotypic diversity as a general mechanism for adapting to change in their environment. IMPORTANCE: Many bacteria employ flagella for motility. These bacteria are often not constitutively motile but become so only in response to specific environmental cues. The most common is nutrient starvation. Interestingly, in Salmonella enterica serovar Typhimurium, nutrients enhance the expression of flagella, suggesting that motility is used for purposes other than foraging. In this work, we investigated how nutrients affect motility in S. enterica and found that nutrients tune the fraction of motile cells within a population. Using both experimental and mathematical analysis, we determined the mechanism governing this tunable response. We further demonstrated that the response is bistable: that is, genetically identical cells can exhibit different phenotypes under identical growth conditions. These results reveal a new facet of motility in S. enterica and demonstrate that nutrients determine not only where these bacteria swim but also the fraction of them that do so.

Indexed as

SerogroupBacterial ProteinsFlagellaGene Expression Regulation, BacterialModels, TheoreticalPhenotypePlasmidsSalmonella typhimuriumSigma FactorTranscription FactorsBacterial ProteinsFliA protein, BacteriaSigma FactorTranscription Factors

Identifiers

PMID25161191
PMCPMC4173784
OpenAlexW2133335412

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.