Evidence map›Paper›PMID 25160752›Full record

ArticleAnimal genetics2014

Haplotype diversity in the equine myostatin gene with focus on variants associated with race distance propensity and muscle fiber type proportions.

Jessica L Petersen, Stephanie J Valberg, James R Mickelson, Molly E McCue

Open access · greenAbstract read
In one paragraph

Article in Animal genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
8.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
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  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Conditionally immortalised equine skeletal muscle cell lines forBiochemistry and biophysics reports · 2023
    Article
  9. Article
  10. Article
  11. Polymorphisms at Myostatin Gene (Animals : an open access journal from MDPI · 2021
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jessica L PetersenVeterinary Population Medicine, University of Minnesota, St Paul, MN, 55108, USA; Department of Animal Science, University of Nebraska, Lincoln, NE, 68583-0908, USA.
Stephanie J Valberg
James R Mickelson
Molly E McCue
University of Minnesota · US

Funding

TRAINING PROGRAM IN MUSCLE RESEARCHT32AR007612 · NIAMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI JAMES M ERVASTI, DAWN A LOWE · 2001 to 2026
$11.3M
Regulation of Glycogen Metabolism: Insights from Novel Genetic ModelsK08AR055713 · NIAMS · UNIVERSITY OF MINNESOTA · PI MCCUE, MOLLY E · 2009 to 2013
$644k
NIAMS NIH HHS 1K08AR055713-01A1NIAMS NIH HHS 2T32AR007612NIAMS NIH HHS K08 AR055713NIAMS NIH HHS T32 AR007612
6 · The paper itself

Abstract

Two variants in the equine myostatin gene (MSTN), including a T/C SNP in the first intron and a 227-bp SINE insertion in the promoter, are associated with muscle fiber type proportions in the Quarter Horse (QH) and with the prediction of race distance propensity in the Thoroughbred (TB). Genotypes from these loci, along with 18 additional variants surrounding MSTN, were examined in 301 horses of 14 breeds to evaluate haplotype relationships and diversity. The C allele of intron 1 was found in 12 of 14 breeds at a frequency of 0.27; the SINE was observed in five breeds, but common in only the TB and QH (0.73 and 0.48 respectively). Haplotype data suggest the SINE insertion is contemporary to and arose upon a haplotype containing the intron 1 C allele. Gluteal muscle biopsies of TBs showed a significant association of the intron 1 C allele and SINE with a higher proportion of Type 2B and lower proportion of Type 1 fibers. However, in the Belgian horse, in which the SINE is not present, the intron 1 SNP was not associated with fiber type proportions, and evaluation of fiber type proportions across the Belgian, TB and QH breeds shows the significant effect of breed on fiber type proportions is negated when evaluating horses without the SINE variant. These data suggest the SINE, rather than the intron 1 SNP, is driving the observed muscle fiber type characteristics and is the variant targeted by selection for short-distance racing.

Indexed as

HaplotypesAnimalsBreedingGene FrequencyGenotypeHorsesIntronsMuscle Fibers, SkeletalMyostatinPolymorphism, Single NucleotidePromoter Regions, GeneticShort Interspersed Nucleotide ElementsMyostatinBelgianQuarter Horseselectionspeedy geneThoroughbredType 1Type 2B

Identifiers

PMID25160752
PMCPMC4211974
OpenAlexW2116434407

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.