Evidence map›Paper›PMID 25160628›Full record

ArticleThe Journal of biological chemistry2014

Homologous recombination is a primary pathway to repair DNA double-strand breaks generated during DNA rereplication.

Lan N Truong, Yongjiang Li, Emily Sun, Katrina Ang, Patty Yi-Hwa Hwang, Xiaohua Wu

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

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  11. Multiple mechanisms contribute to double-strand break repair at rereplication forks in Drosophila follicle cells.Proceedings of the National Academy of Sciences of the United States of America · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Lan N TruongFrom the Department of Molecular and Experimental Medicine, The Scripps Research Institute, La, Jolla, California 92037.
Yongjiang LiFrom the Department of Molecular and Experimental Medicine, The Scripps Research Institute, La, Jolla, California 92037.
Emily SunFrom the Department of Molecular and Experimental Medicine, The Scripps Research Institute, La, Jolla, California 92037.
Katrina AngFrom the Department of Molecular and Experimental Medicine, The Scripps Research Institute, La, Jolla, California 92037.
Patty Yi-Hwa HwangFrom the Department of Molecular and Experimental Medicine, The Scripps Research Institute, La, Jolla, California 92037.
Xiaohua WuFrom the Department of Molecular and Experimental Medicine, The Scripps Research Institute, La, Jolla, California 92037 xiaohwu@scripps.edu.
Scripps Research Institute · US

Funding

Role of the Mre11/Rad50/Nbs1 complex in DNA damage response pathwaysR01CA102361 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, XIAOHUA · 2003 to 2012
$4.1M
Investigating DNA polymerase O in replication stress and cancer therapyR01CA294646 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI Xiaohua Wu · 2024 to 2026
$3.0M
S-phase checkpoint and rereplication in mammalian cellsR01GM080677 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, XIAOHUA · 2010 to 2018
$2.9M
SUPPLEMENT TO INVESTIGATIVE HEMATOLOGYT32DK007022 · NIDDK · SCRIPPS RESEARCH INSTITUTE, THE · PI SOLOMON, DANIEL RENEE · 1986 to 2009
$2.3M
Role of BRCA1 and its association protein CtlP in DNA double-strand break repairR01CA140972 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, XIAOHUA · 2010 to 2014
$2.2M
NCI NIH HHS CA102361NCI NIH HHS CA102361-07S1NCI NIH HHS CA140972NCI NIH HHS CA140972-03S1NCI NIH HHS R01 CA102361NCI NIH HHS R01 CA140972NCI NIH HHS R01 CA294646NIDDK NIH HHS DK007022-30NIDDK NIH HHS T32 DK007022NIGMS NIH HHS GM080677NIGMS NIH HHS R01 GM080677
6 · The paper itself

Abstract

Re-initiation of DNA replication at origins within a given cell cycle would result in DNA rereplication, which can lead to genome instability and tumorigenesis. DNA rereplication can be induced by loss of licensing control at cellular replication origins, or by viral protein-driven multiple rounds of replication initiation at viral origins. DNA double-strand breaks (DSBs) are generated during rereplication, but the mechanisms of how these DSBs are repaired to maintain genome stability and cell viability are poorly understood in mammalian cells. We generated novel EGFP-based DSB repair substrates, which specifically monitor the repair of rereplication-associated DSBs. We demonstrated that homologous recombination (HR) is an important mechanism to repair rereplication-associated DSBs, and sister chromatids are used as templates for such HR-mediated DSB repair. Micro-homology-mediated non-homologous end joining (MMEJ) can also be used but to a lesser extent compared to HR, whereas Ku-dependent classical non-homologous end joining (C-NHEJ) has a minimal role to repair rereplication-associated DSBs. In addition, loss of HR activity leads to severe cell death when rereplication is induced. Therefore, our studies identify HR, the most conservative repair pathway, as the primary mechanism to repair DSBs upon rereplication.

Indexed as

DNA Breaks, Double-StrandedDNA End-Joining RepairDNA RepairHomologous RecombinationRecombination, Geneticbeta-GlobinsCarcinogenesisCell DeathCell Line, TumorCell SeparationCell SurvivalFlow CytometryGreen Fluorescent ProteinsHEK293 CellsHumansNeoplasmsbeta-GlobinsGreen Fluorescent ProteinsRNA, Small InterferingDNA RepairDNA ReplicationDNA RereplicationDSB RepairGenomic InstabilityHomologous RecombinationMMEJViral Replication

Identifiers

PMID25160628
PMCPMC4200250
OpenAlexW2027718992

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.