Evidence map›Paper›PMID 25159823›Full record

ArticleGenome biology2014

Development of synchronous VHL syndrome tumors reveals contingencies and constraints to tumor evolution.

Rosalie Fisher, Stuart Horswell, Andrew Rowan, Maximilian P Salm, Elza C de Bruin, Sakshi Gulati, Nicholas McGranahan, Mark Stares, Marco Gerlinger, Ignacio Varela and 25 more

Registry-linked trialAbstract read
In one paragraph

Article in Genome biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03979833 (Drivers of Hypoxia-induced Angiogenesis in Tumor Development), which is not on this map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03979833 unknown statusnot on this mapstarted 2019, after this paper: background citation

Drivers of Hypoxia-induced Angiogenesis in Tumor Development

TypeobservationalSponsorUniversity of CopenhagenRan2019 to 2020Enrolled10ConditionsVon Hippel-Lindau DiseaseArmsWhole exome sequencing
3 · Its place in the literature

Who cites it

44 citing papers in PubMed.

  1. Trial
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  4. Integrative Clinical and Molecular Evaluation of Renal Cell Carcinoma with Merlin Protein Deficiency and Biallelic Loss of NF2.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors.

Rosalie Fisher
Stuart Horswell
Andrew Rowan
Maximilian P Salm
Elza C de Bruin
Sakshi Gulati
Nicholas McGranahan
Mark Stares
Marco Gerlinger
Ignacio Varela
Andrew Crockford
Francesco Favero
Virginie Quidville
Fabrice André
Carolina Navas
Eva Grönroos
David Nicol
Steve Hazell
David Hrouda
Tim O'Brien
Nik Matthews
Ben Phillimore
Sharmin Begum
Adam Rabinowitz
Jennifer Biggs
Paul A Bates
Neil Q McDonald
Gordon Stamp
Bradley Spencer-Dene
James J Hsieh
Jianing Xu
Lisa Pickering
Martin Gore
James Larkin
Charles Swanton

Funding

Cancer Research UK 10747Cancer Research UK 10748Cancer Research UK 17786Cancer Research UK 19310Medical Research Council G0902275
6 · The paper itself

Abstract

backgroundGenomic analysis of multi-focal renal cell carcinomas from an individual with a germline VHL mutation offers a unique opportunity to study tumor evolution.

resultsWe perform whole exome sequencing on four clear cell renal cell carcinomas removed from both kidneys of a patient with a germline VHL mutation. We report that tumors arising in this context are clonally independent and harbour distinct secondary events exemplified by loss of chromosome 3p, despite an identical genetic background and tissue microenvironment. We propose that divergent mutational and copy number anomalies are contingent upon the nature of 3p loss of heterozygosity occurring early in tumorigenesis. However, despite distinct 3p events, genomic, proteomic and immunohistochemical analyses reveal evidence for convergence upon the PI3K-AKT-mTOR signaling pathway. Four germline tumors in this young patient, and in a second, older patient with VHL syndrome demonstrate minimal intra-tumor heterogeneity and mutational burden, and evaluable tumors appear to follow a linear evolutionary route, compared to tumors from patients with sporadic clear cell renal cell carcinoma.

conclusionsIn tumors developing from a germline VHL mutation, the evolutionary principles of contingency and convergence in tumor development are complementary. In this small set of patients with early stage VHL-associated tumors, there is reduced mutation burden and limited evidence of intra-tumor heterogeneity.

Indexed as

AdultAgedCarcinoma, Renal CellChromosome DeletionChromosomes, Human, Pair 3ExomeGene Expression Regulation, NeoplasticGenetic HeterogeneityGerm-Line MutationHumansKidney NeoplasmsMaleMAP Kinase Signaling SystemMiddle AgedModels, MolecularPhylogeny

Identifiers

PMID25159823
PMCPMC4166471

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.