Evidence map›Paper›PMID 25156736›Full record

ArticleInfection and immunity2014

Role of the oligopeptide permease ABC Transporter of Moraxella catarrhalis in nutrient acquisition and persistence in the respiratory tract.

Megan M Jones, Antoinette Johnson, Mary Koszelak-Rosenblum, Charmaine Kirkham, Aimee L Brauer, Michael G Malkowski, Timothy F Murphy

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 44 citations in OpenAlex.

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  9. Comparative genome analyses ofMicrobial genomics · 2020
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  13. Oligopeptide-binding protein from nontypeableThe Journal of biological chemistry · 2019
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. TheInfection and immunity · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Megan M JonesDepartment of Microbiology and Immunology, University at Buffalo, The State University of New York, Buffalo, New York, USA Clinical and Translational Research Center, University at Buffalo, The State University of New York, Buffalo, New York, USA.
Antoinette JohnsonClinical and Translational Research Center, University at Buffalo, The State University of New York, Buffalo, New York, USA Division of Infectious Diseases, Department of Medicine, University at Buffalo, The State University of New York, Buffalo, New York, USA.
Mary Koszelak-RosenblumDepartment of Structural Biology, University at Buffalo, The State University of New York, Buffalo, New York, USA Hauptman Woodward Medical Research Institute, Buffalo, New York, USA.
Charmaine KirkhamClinical and Translational Research Center, University at Buffalo, The State University of New York, Buffalo, New York, USA Division of Infectious Diseases, Department of Medicine, University at Buffalo, The State University of New York, Buffalo, New York, USA.
Aimee L BrauerClinical and Translational Research Center, University at Buffalo, The State University of New York, Buffalo, New York, USA Division of Infectious Diseases, Department of Medicine, University at Buffalo, The State University of New York, Buffalo, New York, USA.
Michael G MalkowskiDepartment of Structural Biology, University at Buffalo, The State University of New York, Buffalo, New York, USA Hauptman Woodward Medical Research Institute, Buffalo, New York, USA.
Timothy F MurphyDepartment of Microbiology and Immunology, University at Buffalo, The State University of New York, Buffalo, New York, USA Clinical and Translational Research Center, University at Buffalo, The State University of New York, Buffalo, New York, USA Division of Infectious Diseases, Department of Medicine, University at Buffalo, The State University of New York, Buffalo, New York, USA murphyt@buffalo.edu.
University at Buffalo, State University of New York · USHauptman-Woodward Medical Research Institute · US

Funding

Multi-Level Optimization of Membrane Proteins for CrystallographyU54GM094611 · NIGMS · HAUPTMAN-WOODWARD MEDICAL RESEARCH INST · PI DUMONT, MARK E. · 2010 to 2014
$6.3M
TRAINING IN MICROBIAL PATHOGENESIST32AI007614 · NIAID · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI READ, LAURIE K. · 1999 to 2015
$2.1M
Moraxella catarrhalis: virulence-based preventionR01DC012200 · NIDCD · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI MURPHY, TIMOTHY F · 2012 to 2016
$1.8M
NIAID NIH HHS 5T32AI007614-12NIAID NIH HHS T32 AI007614NIDCD NIH HHS DC01220NIDCD NIH HHS R01 DC012200NIGMS NIH HHS GM094611NIGMS NIH HHS U54 GM094611
6 · The paper itself

Abstract

Moraxella catarrhalis is a strict human pathogen that causes otitis media in children and exacerbations of chronic obstructive pulmonary disease in adults, resulting in significant worldwide morbidity and mortality. M. catarrhalis has a growth requirement for arginine; thus, acquiring arginine is important for fitness and survival. M. catarrhalis has a putative oligopeptide permease ABC transport operon (opp) consisting of five genes (oppB, oppC, oppD, oppF, and oppA), encoding two permeases, two ATPases, and a substrate binding protein. Thermal shift assays showed that the purified recombinant substrate binding protein OppA binds to peptides 3 to 16 amino acid residues in length regardless of the amino acid composition. A mutant in which the oppBCDFA gene cluster is knocked out showed impaired growth in minimal medium where the only source of arginine came from a peptide 5 to 10 amino acid residues in length. Whether methylated arginine supports growth of M. catarrhalis is important in understanding fitness in the respiratory tract because methylated arginine is abundant in host tissues. No growth of wild-type M. catarrhalis was observed in minimal medium in which arginine was present only in methylated form, indicating that the bacterium requires l-arginine. An oppA knockout mutant showed marked impairment in its capacity to persist in the respiratory tract compared to the wild type in a mouse pulmonary clearance model. We conclude that the Opp system mediates both uptake of peptides and fitness in the respiratory tract.

Indexed as

AnimalsBacterial ProteinsCloning, MolecularGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicMembrane Transport ProteinsMiceMice, Inbred BALB CMoraxella catarrhalisMoraxellaceae InfectionsMultigene FamilyMutationRecombinant ProteinsRespiratory Tract InfectionsBacterial ProteinsMembrane Transport Proteinsoligopeptide permease, BacteriaRecombinant Proteins

Identifiers

PMID25156736
PMCPMC4249328
OpenAlexW2157719562

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.