Evidence map›Paper›PMID 25156489›Full record

ArticlePlanta2014

Genome-wide fungal stress responsive miRNA expression in wheat.

Behçet Inal, Mine Türktaş, Hakan Eren, Emre Ilhan, Sezer Okay, Mehmet Atak, Mustafa Erayman, Turgay Unver

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
13.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 78 citations in OpenAlex.

  1. Article
  2. An3 Biotech · 2025
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  5. Article
  6. Characterization of microRNAs and Target Genes inPlants (Basel, Switzerland) · 2023
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  7. Review
  8. Genome-wide identification and characterization ofFrontiers in plant science · 2023
    Article
  9. Leaf rust responsive miRNA and their target genes in wheat.Functional & integrative genomics · 2022
    Article
  10. Article
  11. Differential expression profiling of microRNAs and their target genes during wheat-Physiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Behçet InalDepartment of Biology, Faculty of Science, Cankiri Karatekin University, 18100, Cankiri, Turkey.
Mine Türktaş
Hakan Eren
Emre Ilhan
Sezer Okay
Mehmet Atak
Mustafa Erayman
Turgay Unver
Çankırı Karatekin University · TRMustafa Kemal University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MicroRNAs (miRNAs) are small non-coding class of RNAs. They were identified in many plants with their diverse regulatory roles in several cellular and metabolic processes. A number of miRNAs were involved in biotic and abiotic stress responses. Here, fungal stress responsive wheat miRNAs were analyzed by using miRNA-microarray strategy. Two different fungi (Fusarium culmorum and Bipolaris sorokiniana) were inoculated on resistant and sensitive wheat cultivars. A total of 87 differentially regulated miRNAs were detected in the 8 × 15 K array including all of the available plant miRNAs. Using bioinformatics tools, the target transcripts of responsive miRNAs were predicted, and related biological processes and mechanisms were assessed. A number of the miRNAs such as miR2592s, miR869.1, miR169b were highly differentially regulated showing more than 200-fold change upon fungal-inoculation. Some of the miRNAs were identified as fungal-inoculation responsive for the first time. The analyses showed that some of the differentially regulated miRNAs targeted resistance-related genes such as LRR, glucuronosyl transferase, peroxidase and Pto kinase. The comparison of the two miRNA-microarray analyses indicated that fungal-responsive wheat miRNAs were differentially regulated in pathogen- and cultivar-specific manners.

Indexed as

Gene Expression Regulation, PlantGenome, PlantAscomycotaFusariumGene OntologyGenes, PlantMicroRNAsOligonucleotide Array Sequence AnalysisReal-Time Polymerase Chain ReactionReproducibility of ResultsRNA, MessengerStress, PhysiologicalTriticumMicroRNAsRNA, Messenger

Identifiers

PMID25156489
OpenAlexW2046311538

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.