Evidence map›Paper›PMID 25155166›Full record

ArticleScientific reports2014

Spatial heterogeneity of gut microbiota reveals multiple bacterial communities with distinct characteristics.

Hsiao-Pei Lu, Yung-Chih Lai, Shiao-Wei Huang, Huang-Chi Chen, Chih-hao Hsieh, Hon-Tsen Yu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Article
  3. The role of animal hosts in shaping gut microbiome variation.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
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  5. Article
  6. The Skin Microbiome: Current Landscape and Future Opportunities.International journal of molecular sciences · 2023
    Review
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hsiao-Pei Lu1] Department of Life Science, National Taiwan University, Taipei, Taiwan, ROC 10617 [2].
Yung-Chih LaiDepartment of Life Science, National Taiwan University, Taipei, Taiwan, ROC 10617.
Shiao-Wei HuangDepartment of Life Science, National Taiwan University, Taipei, Taiwan, ROC 10617.
Huang-Chi ChenDepartment of Life Science, National Taiwan University, Taipei, Taiwan, ROC 10617.
Chih-hao Hsieh1] Institute of Oceanography, National Taiwan University, Taipei, Taiwan, ROC 10617 [2] Institute of Ecology and Evolutionary Biology, National Taiwan University, Taipei, Taiwan, ROC 10617.
Hon-Tsen Yu1] Department of Life Science, National Taiwan University, Taipei, Taiwan, ROC 10617 [2] Genome and Systems Biology Degree Program, National Taiwan University, Taipei, Taiwan, ROC 10617.
National Taiwan University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We analyzed bacterial communities of six distinct gut sites (the food bolus and mucus layer of the proximal small intestine, cecum and distal large intestine), using wild folivorous flying squirrels. We found significant spatial heterogeneity in composition, diversity, and species abundance distributions (SADs) of gut microbiota, corresponding to physicochemical conditions. High diversity was detected in the mucus layer of small intestine and the food bolus of cecum, followed by the food bolus of large intestine and the mucus layer of cecum, and relatively low diversity in the food bolus of small intestine and the mucus layer of large intestine, likely due to disturbance and resource partitioning. The SADs showed succession-like patterns in the food bolus communities from the proximal to distal gut. Notably, each mucus layer community had a unique pattern different from the food bolus community of the same compartment, with distinct relative abundances of dominant species. In combination with data from other mammalian fecal samples, we concluded that gut microbiota were apparently dynamic in community structure, from low species richness with unequal abundances to high species richness with equal abundances; these findings were interpreted as strong habitat effects on bacterial communities.

Indexed as

AnimalsChiropteraFecesGastrointestinal TractIntestinal MucosaMicrobiota

Identifiers

PMID25155166
PMCPMC5385803
OpenAlexW2006797603

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.