Evidence map›Paper›PMID 25154760›Full record

ArticleMedical oncology (Northwood, London, England)2014

Investigation of DNA repair gene variants on myelodysplastic syndromes in a Turkish population.

Mehmet Burak Aktuglu, Mesut Ayer, Elif S Bireller, Cagla Rencuzogullari, Hasan Acik, Zeynep Karaali, Taner Alioglu, Namik Yigit, Mustafa Velet, Eray Atalay and 2 more

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In one paragraph

Article in Medical oncology (Northwood, London, England), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 7 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Mehmet Burak AktugluDepartment of Internal Medicine, Istanbul Haseki Training and Research Hospital, Istanbul, Turkey, lifeiner@yahoo.com.
Mesut Ayer
Elif S Bireller
Cagla Rencuzogullari
Hasan Acik
Zeynep Karaali
Taner Alioglu
Namik Yigit
Mustafa Velet
Eray Atalay
Oznur Sari Ure
Bedia Cakmakoglu
Haseki Eğitim ve Araştırma Hastanesi · TRIstanbul University · TRBağcılar Eğitim ve Araştırma Hastanesi · TRKafkas University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this study was to assess the possible influence of genetic polymorphisms in hOGG1, XRCC1, XRCC3, XPD, XPG and APE1 on the observed DNA damage in a group of Turkish myelodysplastic syndrome (MDS) patients. A total of 39 patients with myelodysplastic syndrome and 78 age-matched healthy control subjects were included in our study. Polymerase chain reaction/restriction fragment length polymorphism analysis was performed for the detection of DNA repair gene variants. No significant differences in DNA repair enzymes APE1, XRCC1 and XPG were found between MDS patients and controls. On the other hand, XRCC3, XPD and hOGG1 were associated with an increased risk of MDS (p=0.004, p=0.000, p=0.017, respectively). Specifically, Thr/Met genotype was more relevant in patients (p=0.026) in XRCC3; in hOGG1, Cys+ genotype was found higher in patients (p=0.017); and in XPD, Gln/Gln genotypes were found higher in the patient (p=0.001). In conclusion, XRCC3, XPD and hOGG1 genotypes are associated with an increased MDS risk, suggesting their possible involvement in the pathogenesis and biology of this disease.

Indexed as

Genetic Predisposition to DiseasePolymorphism, GeneticAdultDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA Excision Repair Protein ERCC-5DNA GlycosylasesDNA RepairEndonucleasesFemaleGenotypeHumansMaleMiddle AgedMyelodysplastic SyndromesNuclear ProteinsAPEX1 protein, humanDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA Excision Repair Protein ERCC-5DNA GlycosylasesEndonucleasesERCC2 protein, humanNuclear Proteinsoxoguanine glycosylase 1, humanTranscription FactorsXeroderma Pigmentosum Group D ProteinX-ray Repair Cross Complementing Protein 1X-ray repair cross complementing protein 3XRCC1 protein, human

Identifiers

PMID25154760
OpenAlexW1987096241

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.