Evidence map›Paper›PMID 25153714›Full record

ArticlePloS one2014

Medium effects on minimum inhibitory concentrations of nylon-3 polymers against E. coli.

Heejun Choi, Saswata Chakraborty, Runhui Liu, Samuel H Gellman, James C Weisshaar

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 42 citations in OpenAlex.

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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Heejun ChoiDepartment of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Saswata ChakrabortyDepartment of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Runhui LiuDepartment of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Samuel H GellmanDepartment of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, United States of America; Molecular Biophysics Program, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
James C WeisshaarDepartment of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, United States of America; Molecular Biophysics Program, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
University of Wisconsin–Madison · US

Funding

Dynamics of Antimicrobial Peptide Interactions with Bacterial MembranesR01GM094510 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI WEISSHAAR, JAMES C. · 2010 to 2018
$2.2M
Design and Analysis of Random Copolymers with Antimicrobial ActivityR01GM093265 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI WEISSHAAR, JAMES C. · 2011 to 2018
$2.1M
NIGMS NIH HHS R01 GM093265NIGMS NIH HHS R01GM093265NIGMS NIH HHS R01 GM094510NIGMS NIH HHS R01GM094510
6 · The paper itself

Abstract

Minimum inhibitory concentrations (MICs) against E. coli were measured for three nylon-3 polymers using Luria-Bertani broth (LB), brain-heart infusion broth (BHI), and a chemically defined complete medium (EZRDM). The polymers differ in the ratio of hydrophobic to cationic subunits. The cationic homopolymer is inert against E. coli in BHI and LB, but becomes highly potent in EZRDM. A mixed hydrophobic/cationic polymer with a hydrophobic t-butylbenzoyl group at its N-terminus is effective in BHI, but becomes more effective in EZRDM. Supplementation of EZRDM with the tryptic digest of casein (often found in LB) recapitulates the LB and BHI behavior. Additional evidence suggests that polyanionic peptides present in LB and BHI may form electrostatic complexes with cationic polymers, decreasing activity by diminishing binding to the anionic lipopolysaccharide layer of E. coli. In contrast, two natural antimicrobial peptides show no medium effects. Thus, the use of a chemically defined medium helps to reveal factors that influence antimicrobial potency of cationic polymers and functional differences between these polymers and evolved antimicrobial peptides.

Indexed as

Anti-Bacterial AgentsAntimicrobial Cationic PeptidesEscherichia coliHydrophobic and Hydrophilic InteractionsMicrobial Sensitivity TestsNylonsPolymersStructure-Activity RelationshipAnti-Bacterial AgentsAntimicrobial Cationic PeptidesNylonsPolymers

Identifiers

PMID25153714
PMCPMC4143223
OpenAlexW1982417739

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.