ArticlePloS one2014
Detection of genome donor species of neglected tetraploid crop Vigna reflexo-pilosa (créole bean), and genetic structure of diploid species based on newly developed EST-SSR markers from azuki bean (Vigna angularis).
Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.
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28 citing papers in PubMed, 57 citations in OpenAlex.
- A Novel Approach Using SSR Markers for Identifying and Breeding Bruchid Pest-Resistant Blackgram (Vigna mungo L. Hepper) Genotypes.Methods in molecular biology (Clifton, N.J.) · 2026Article
- Genetic and Cyto-Histological Analyses inInternational journal of molecular sciences · 2025Article
- Assembly and analysis of the complete mitochondrial and chloroplast genomes of Vigna reflexo-pilosa.PloS one · 2025Article
- Taxonomic history, morphology, evolution, gene pool and stress tolerances of azuki bean and its related wildBreeding science · 2024Article
- Unraveling the maternal and paternal origins of allotetraploid Vigna reflexo-pilosa.Scientific reports · 2023Article
- Analysis of Genetic Diversity in Adzuki Beans (Plants (Basel, Switzerland) · 2023Article
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- Genetics, genomics, and breeding of black gram [Frontiers in plant science · 2023Review
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- Molecular Analysis of Genetic Diversity and Structure of the Lablab (Plants (Basel, Switzerland) · 2022Article
- Novel and stable QTL regions conferring resistance to MYMV disease and its inheritance in blackgram (Journal of genetics · 2022Article
- Genetic diversity and population genetic structure analysis of an extensive collection of wild and cultivated Vigna accessions.Molecular genetics and genomics : MGG · 2021Article
- Genetic diversity and structure of landrace of lablab (Breeding science · 2021Article
- Transcriptome Analysis Reveals Key Pathways and Candidate Genes Controlling Seed Development and Size in Ricebean (Frontiers in genetics · 2021Article
- Microsatellite-based association mapping for agronomic traits in mungbean (Journal of genetics · 2021Article
- Association mapping for3 Biotech · 2020Article
- Construction of genetic linkage map and genome dissection of domestication-related traits of moth bean (Vigna aconitifolia), a legume crop of arid areas.Molecular genetics and genomics : MGG · 2019Article
- Identification of genes associated with stress tolerance in moth bean [Physiology and molecular biology of plants : an international journal of functional plant biology · 2018Article
- QTL analysis of domestication syndrome in zombi pea (Vigna vexillata), an underutilized legume crop.PloS one · 2018Article
- De novo transcriptomic analysis of cowpea (Vigna unguiculata L. Walp.) for genic SSR marker development.BMC genetics · 2017Article
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10 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Vigna reflexo-pilosa, which includes a neglected crop, is the only one tetraploid species in genus Vigna. The ancestral species that make up this allotetraploid species have not conclusively been identified, although previous studies suggested that a donor genome of V. reflexo-pilosa is V. trinervia. In this study, 1,429 azuki bean EST-SSR markers were developed of which 38 EST-SSR primer pairs that amplified one product in diploid species and two discrete products in tetraploid species were selected to analyze 268 accessions from eight taxa of seven Asian Vigna species including V. reflexo-pilosa var. glabra, V. reflexo-pilosa var. reflexo-pilosa, V. exilis, V. hirtella, V. minima, V. radiata var. sublobata, V. tenuicaulis and V. trinervia to identify genome donor of V. reflexo-pilosa. Since both diploid and tetraploid species were analyzed and each SSR primer pair detected two loci in the tetraploid species, we separated genomes of the tetraploid species into two different diploid types, viz. A and B. In total, 445 alleles were detected by 38 EST-SSR markers. The highest gene diversity was observed in V. hirtella. By assigning the discrete PCR products of V. reflexo-pilosa into two distinguished genomes, we were able to identify the two genome donor parents of créole bean. Phylogenetic and principal coordinate analyses suggested that V. hirtella is a species complex and may be composed of at least three distinct taxa. Both analyses also clearly demonstrated that V. trinervia and one taxon of V. hirtella are the genome donors of V. reflexo-pilosa. Gene diversity indicates that the evolution rate of EST-SSRs on genome B of créole bean might be faster than that on genome A. Species relationship among the Vigna species in relation to genetic data, morphology and geographical distribution are presented.
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