Evidence map›Paper›PMID 25153179›Full record

ArticlePloS one2014

An enzymatic platform for the synthesis of isoprenoid precursors.

Sofia B Rodriguez, Thomas S Leyh

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Cell-free biosynthesis of limonene using enzyme-enrichedSynthetic biology (Oxford, England) · 2019
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Sofia B RodriguezThe Department of Microbiology & Immunology, The Albert Einstein College of Medicine, Bronx, New York, United States of America.
Thomas S LeyhThe Department of Microbiology & Immunology, The Albert Einstein College of Medicine, Bronx, New York, United States of America.
Albert Einstein College of Medicine · US

Funding

SULFATE ADENYLATION-BIOCHEMISTRY &ENZYMOLOGYR01GM054469 · NIGMS · YESHIVA UNIVERSITY · PI LEYH, THOMAS S. · 1995 to 2011
$4.7M
The Mevalonate Pathway in StreptococcusR01AI068989 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI LEYH, THOMAS S. · 2006 to 2010
$2.7M
Sulfotransferase Specificity and the Development of Sulfation Resistant CompoundsR01GM106158 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI LEYH, THOMAS S. · 2014 to 2016
$1.1M
NIAID NIH HHS NIH AI068989NIAID NIH HHS R01 AI068989NIGMS NIH HHS NIH GM106158NIGMS NIH HHS NIH GM54469NIGMS NIH HHS R01 GM054469NIGMS NIH HHS R01 GM106158
6 · The paper itself

Abstract

The isoprenoid family of compounds is estimated to contain ∼ 65,000 unique structures including medicines, fragrances, and biofuels. Due to their structural complexity, many isoprenoids can only be obtained by extraction from natural sources, an inherently risky and costly process. Consequently, the biotechnology industry is attempting to genetically engineer microorganisms that can produce isoprenoid-based drugs and fuels on a commercial scale. Isoprenoid backbones are constructed from two, five-carbon building blocks, isopentenyl 5-pyrophosphate and dimethylallyl 5-pyrophosphate, which are end-products of either the mevalonate or non-mevalonate pathways. By linking the HMG-CoA reductase pathway (which produces mevalonate) to the mevalonate pathway, these building block can be synthesized enzymatically from acetate, ATP, NAD(P)H and CoA. Here, the enzymes in these pathways are used to produce pathway intermediates and end-products in single-pot reactions and in remarkably high yield, ∼ 85%. A strategy for the regio-specific incorporation of isotopes into isoprenoid backbones is developed and used to synthesize a series of isotopomers of diphosphomevalonate, the immediate end-product of the mevalonate pathway. The enzymatic system is shown to be robust and capable of producing quantities of product in aqueous solutions that meet or exceed the highest levels achieved using genetically engineered organisms in high-density fermentation.

Indexed as

Escherichia coliHydroxymethylglutaryl CoA ReductasesMevalonic AcidTerpenesHydroxymethylglutaryl CoA ReductasesMevalonic AcidTerpenes

Identifiers

PMID25153179
PMCPMC4143292
OpenAlexW2051812347

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.