Evidence map›Paper›PMID 25153139›Full record

ArticlePloS one2014

Association mapping of seed oil and protein content in Sesamum indicum L. using SSR markers.

Chun Li, Hongmei Miao, Libin Wei, Tide Zhang, Xiuhua Han, Haiyang Zhang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
5.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 65 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Sesame (Nutrients · 2022
    Review
  6. Article
  7. Article
  8. The Oleic/Linoleic Acid Ratio in Olive (Frontiers in plant science · 2021
    Article
  9. Article
  10. Genome-Wide Discovery of InDel Markers in Sesame (Plants (Basel, Switzerland) · 2020
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. The Emerging Oilseed CropFrontiers in plant science · 2017
    Review
  16. A physical map of important QTLs, functional markers and genes available for sesame breeding programs.Physiology and molecular biology of plants : an international journal of functional plant biology · 2016
    Article
  17. Article
  18. Sesamol suppresses the inflammatory response by inhibiting NF-κB/MAPK activation and upregulating AMP kinase signaling in RAW 264.7 macrophages.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Chun LiHenan Sesame Research Center, Henan Academy of Agricultural Sciences, Zhengzhou, Henan, People's Republic of China.
Hongmei MiaoHenan Sesame Research Center, Henan Academy of Agricultural Sciences, Zhengzhou, Henan, People's Republic of China.
Libin WeiHenan Sesame Research Center, Henan Academy of Agricultural Sciences, Zhengzhou, Henan, People's Republic of China.
Tide ZhangHenan Sesame Research Center, Henan Academy of Agricultural Sciences, Zhengzhou, Henan, People's Republic of China.
Xiuhua HanHenan Sesame Research Center, Henan Academy of Agricultural Sciences, Zhengzhou, Henan, People's Republic of China.
Haiyang ZhangHenan Sesame Research Center, Henan Academy of Agricultural Sciences, Zhengzhou, Henan, People's Republic of China.
Henan Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sesame is an important oil crop for the high oil content and quality. The seed oil and protein contents are two important traits in sesame. To identify the molecular markers associated with the seed oil and protein contents in sesame, we systematically performed the association mapping among 369 worldwide germplasm accessions under 5 environments using 112 polymorphic SSR markers. The general linear model (GLM) was applied with the criteria of logP ≥ 3.0 and high stability under all 5 environments. Among the 369 sesame accessions, the oil content ranged from 27.89%-58.73% and the protein content ranged from 16.72%-27.79%. A significant negative correlation of the oil content with the protein content was found in the population. A total of 19 markers for oil content were detected with a R2 value range from 4% to 29%; 24 markers for protein content were detected with a R2 value range from 3% to 29%, of which 19 markers were associated with both traits. Moreover, partial markers were confirmed using mixed linear model (MLM) method, which suggested that the oil and protein contents are controlled mostly by major genes. Allele effect analysis showed that the allele associated with high oil content was always associated with low protein content, and vice versa. Of the 19 markers associated with oil content, 17 presented near the locations of the plant lipid pathway genes and 2 were located just next to a fatty acid elongation gene and a gene encoding Stearoyl-ACP Desaturase, respectively. The findings provided a valuable foundation for oil synthesis gene identification and molecular marker assistant selection (MAS) breeding in sesame.

Indexed as

Genes, PlantPolymorphism, GeneticAllelesLinkage DisequilibriumPhenotypeSeedsSesame OilSesamumSesame Oil

Identifiers

PMID25153139
PMCPMC4143287
OpenAlexW1997711583

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.