Evidence map›Paper›PMID 25151136›Full record

ArticleNature chemical biology2014

Archaeal Elp3 catalyzes tRNA wobble uridine modification at C5 via a radical mechanism.

Kiruthika Selvadurai, Pei Wang, Joseph Seimetz, Raven H Huang

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 113 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Review
  5. Article
  6. The life and times of a tRNA.RNA (New York, N.Y.) · 2023
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Highlighting the Unique Roles of RadicalJournal of bacteriology · 2022
    Review
  14. Review
  15. Review
  16. Article
  17. AtELP4 a subunit of the Elongator complex inFrontiers in plant science · 2022
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kiruthika SelvaduraiDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Pei WangDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Joseph SeimetzDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Raven H HuangDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
University of Illinois Urbana-Champaign · US

Funding

Structure and Function of the Elongator ComplexR01GM107533 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI HUANG, RAVEN H · 2014 to 2017
$1.2M
NIGMS NIH HHS GM107533NIGMS NIH HHS R01 GM107533
6 · The paper itself

Abstract

Approximately 25% of cytoplasmic tRNAs in eukaryotic organisms have the wobble uridine (U34) modified at C5 through a process that, according to genetic studies, is carried out by the eukaryotic Elongator complex. Here we show that a single archaeal protein, the homolog of the third subunit of the eukaryotic Elongator complex (Elp3), is able to catalyze the same reaction. The mechanism of action by Elp3 described here represents unprecedented chemistry performed on acetyl-CoA.

Indexed as

Amino Acid SequenceArchaeal ProteinsBiocatalysisConserved SequenceEscherichia coliFree RadicalsGene ExpressionHistone AcetyltransferasesMethanocaldococcusMolecular Sequence DataNerve Tissue ProteinsProtein Structure, TertiaryProtein SubunitsRecombinant ProteinsRNA, TransferSaccharomyces cerevisiae ProteinsArchaeal ProteinsELP3 protein, humanElp3 protein, S cerevisiaeFree RadicalsHistone AcetyltransferasesNerve Tissue ProteinsProtein SubunitsRecombinant ProteinsRNA, TransferSaccharomyces cerevisiae ProteinsS-AdenosylmethionineUridine

Identifiers

PMID25151136
PMCPMC4479141
OpenAlexW2059937018

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.