Evidence map›Paper›PMID 25150295›Full record

ArticleBlood2014

Hmga2 is a direct target gene of RUNX1 and regulates expansion of myeloid progenitors in mice.

Kentson Lam, Alexander Muselman, Randal Du, Yuka Harada, Amanda G Scholl, Ming Yan, Shinobu Matsuura, Stephanie Weng, Hironori Harada, Dong-Er Zhang

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 47 citations in OpenAlex.

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  15. Review
  16. HMGA Genes and Proteins in Development and Evolution.International journal of molecular sciences · 2020
    Review
  17. [Key transcription factors in myeloid hematopoiesis].Zhonghua xue ye xue za zhi = Zhonghua xueyexue zazhi · 2019
    Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Kentson LamMoores UCSD Cancer Center, University of California-San Diego, La Jolla, CA;
Alexander MuselmanMoores UCSD Cancer Center, University of California-San Diego, La Jolla, CA;
Randal DuMoores UCSD Cancer Center, University of California-San Diego, La Jolla, CA;
Yuka HaradaResearch Institute for Radiation Biology and Medicine, Hiroshima University, Hiroshima, Japan; and.
Amanda G SchollMoores UCSD Cancer Center, University of California-San Diego, La Jolla, CA; Departments of Pathology and Division of Biological Sciences, University of California-San Diego, La Jolla, CA.
Ming YanMoores UCSD Cancer Center, University of California-San Diego, La Jolla, CA;
Shinobu MatsuuraMoores UCSD Cancer Center, University of California-San Diego, La Jolla, CA;
Stephanie WengMoores UCSD Cancer Center, University of California-San Diego, La Jolla, CA;
Hironori HaradaResearch Institute for Radiation Biology and Medicine, Hiroshima University, Hiroshima, Japan; and.
Dong-Er ZhangMoores UCSD Cancer Center, University of California-San Diego, La Jolla, CA; Departments of Pathology and Division of Biological Sciences, University of California-San Diego, La Jolla, CA.
Moores Cancer CenterUniversity of California, San Diego · USHiroshima University · JP

Funding

VIRAL MALIGNANCYP30CA023100 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DIANE M SIMEONE · 1985 to 2026
$124.9M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007198 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHI, NEIL C, INSEL, PAUL A · 1985 to 2024
$29.3M
GENETIC MECHANISMS AND REGULATIONT32GM007240 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMPTON, RANDOLPH Y. · 1985 to 2019
$23.8M
Hematopoietic stem cell commitmentP01DK080665 · NIDDK · BETH ISRAEL DEACONESS MEDICAL CENTER · PI TENEN, DANIEL G · 2008 to 2012
$7.3M
Synergestic roles of SRSF2 and RUNX1 in blood cell development and pathologyR01DK098808 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ZHANG, DONG-ER · 2013 to 2022
$4.8M
Combinatorial Profiling and Characterization of AML1 Function in HematopoiesisF30HL103106 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LAM, KENTSON · 2011 to 2014
$159k
Novel molecular targets of RUNX in hematopoietic stem/progenitor cellsF32HL091641 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MATSUURA, SHINOBU · 2008 to 2010
$155k
NCI NIH HHS P30 CA023100NHLBI NIH HHS F30 HL103106NHLBI NIH HHS F32 HL091641NHLBI NIH HHS HL103106NIDDK NIH HHS DK080665NIDDK NIH HHS DK098808NIDDK NIH HHS P01 DK080665NIDDK NIH HHS R01 DK098808NIGMS NIH HHS T32 GM007198NIGMS NIH HHS T32 GM007240
6 · The paper itself

Abstract

RUNX1 is a master transcription factor in hematopoiesis and mediates the specification and homeostasis of hematopoietic stem and progenitor cells (HSPCs). Disruptions in RUNX1 are well known to lead to hematologic disease. In this study, we sought to identify and characterize RUNX1 target genes in HSPCs by performing RUNX1 chromatin immunoprecipitation with high-throughput sequencing (ChIP-seq) using a murine HSPC line and complementing this data with our previously described gene expression profiling of primary wild-type and RUNX1-deficient HSPCs (Lineage(-)/cKit(+)/Sca1(+)). From this analysis, we identified and confirmed that Hmga2, a known oncogene, as a direct target of RUNX1. Hmga2 was strongly upregulated in RUNX1-deficient HSPCs, and the promoter of Hmga2 was responsive in a cell-type dependent manner upon coexpression of RUNX1. Conditional Runx1 knockout mice exhibit expansion of their HSPCs and myeloid progenitors as hallmark phenotypes. To further validate and establish that Hmga2 plays a role in inducing HSPC expansion, we generated mouse models of HMGA2 and RUNX1 deficiency. Although mice lacking both factors continued to display higher frequencies of HSPCs, the expansion of myeloid progenitors was effectively rescued. The data presented here establish Hmga2 as a transcriptional target of RUNX1 and a critical regulator of myeloid progenitor expansion.

Indexed as

Gene Expression RegulationAnimalsBinding SitesCell LineCore Binding Factor Alpha 2 SubunitHematopoiesisHematopoietic Stem CellsHMGA2 ProteinHumansJurkat CellsK562 CellsMiceMice, KnockoutMice, TransgenicMyeloid Progenitor CellsNIH 3T3 CellsCore Binding Factor Alpha 2 SubunitHMGA2 ProteinRunx1 protein, mouseTranscription Factors

Identifiers

PMID25150295
PMCPMC4183983
OpenAlexW1975802976

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.