Evidence map›Paper›PMID 25149516›Full record

ArticleApplied and environmental microbiology2014

Regulation of gene expression in diverse cyanobacterial species by using theophylline-responsive riboswitches.

Amy T Ma, Calvin M Schmidt, James W Golden

Open access · bronzeAbstract readEvaluation Study
In one paragraph

Article in Applied and environmental microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 129 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Circadian clock proteins KaiB and Rbp2 ofMicrobiology spectrum · 2026
    Article
  5. Article
  6. Toward predictable universal genetic circuit design.Quantitative biology (Beijing, China) · 2024
    Article
  7. Development ofFrontiers in microbiology · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. The Molecular Toolset and Techniques Required to Build Cyanobacterial Cell Factories.Advances in biochemical engineering/biotechnology · 2023
    Article
  13. Article
  14. Review
  15. Article
  16. Sustainable citric acid production from COFrontiers in microbiology · 2022
    Article
  17. pSHDY: A New Tool for Genetic Engineering of Cyanobacteria.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  18. Article
  19. Review
  20. Heterologous production of cyanobacterial compounds.Journal of industrial microbiology & biotechnology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Amy T MaDivision of Biological Sciences, University of California San Diego, La Jolla, California, USA.
Calvin M SchmidtDivision of Biological Sciences, University of California San Diego, La Jolla, California, USA.
James W GoldenDivision of Biological Sciences, University of California San Diego, La Jolla, California, USA jwgolden@ucsd.edu.
University of California, San Diego · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cyanobacteria are photosynthetic bacteria that are currently being developed as biological production platforms. They derive energy from light and carbon from atmospheric carbon dioxide, and some species can fix atmospheric nitrogen. One advantage of developing cyanobacteria for renewable production of biofuels and other biological products is that they are amenable to genetic manipulation, facilitating bioengineering and synthetic biology. To expand the currently available genetic toolkit, we have demonstrated the utility of synthetic theophylline-responsive riboswitches for effective regulation of gene expression in four diverse species of cyanobacteria, including two recent isolates. We evaluated a set of six riboswitches driving the expression of a yellow fluorescent protein reporter in Synechococcus elongatus PCC 7942, Leptolyngbya sp. strain BL0902, Anabaena sp. strain PCC 7120, and Synechocystis sp. strain WHSyn. We demonstrated that riboswitches can offer regulation of gene expression superior to that of the commonly used isopropyl-β-d-thiogalactopyranoside induction of a lacI(q)-Ptrc promoter system. We also showed that expression of the toxic protein SacB can be effectively regulated, demonstrating utility for riboswitch regulation of proteins that are detrimental to biomass accumulation. Taken together, the results of this work demonstrate the utility and ease of use of riboswitches in the context of genetic engineering and synthetic biology in diverse cyanobacteria, which will facilitate the development of algal biotechnology.

Indexed as

Bacterial ProteinsCyanobacteriaGene Expression Regulation, BacterialGenes, ReporterGenetics, MicrobialLuminescent ProteinsMolecular BiologyRiboswitchTheophyllineBacterial ProteinsLuminescent ProteinsRiboswitchTheophyllineyellow fluorescent protein, Bacteria

Identifiers

PMID25149516
PMCPMC4249034
OpenAlexW2160243998

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.