Evidence map›Paper›PMID 25148684›Full record

ArticleThe Journal of biological chemistry2014

Structural basis for different phosphoinositide specificities of the PX domains of sorting nexins regulating G-protein signaling.

Caroline Mas, Suzanne J Norwood, Andrea Bugarcic, Genevieve Kinna, Natalya Leneva, Oleksiy Kovtun, Rajesh Ghai, Lorena E Ona Yanez, Jasmine L Davis, Rohan D Teasdale and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 48 citations in OpenAlex.

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  15. Phosphoinositide Recognition Sites Are Blocked by Metabolite Attachment.Frontiers in cell and developmental biology · 2021
    Article
  16. Lipid rafts are required for effective renal DFASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Caroline MasFrom the Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland 4072, Australia.
Suzanne J NorwoodFrom the Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland 4072, Australia.
Andrea BugarcicFrom the Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland 4072, Australia.
Genevieve KinnaFrom the Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland 4072, Australia.
Natalya LenevaFrom the Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland 4072, Australia.
Oleksiy KovtunFrom the Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland 4072, Australia.
Rajesh GhaiFrom the Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland 4072, Australia.
Lorena E Ona YanezFrom the Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland 4072, Australia.
Jasmine L DavisFrom the Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland 4072, Australia.
Rohan D TeasdaleFrom the Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland 4072, Australia.
Brett M CollinsFrom the Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland 4072, Australia b.collins@imb.uq.edu.au.
University of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sorting nexins (SNXs) or phox homology (PX) domain containing proteins are central regulators of cell trafficking and signaling. A subfamily of PX domain proteins possesses two unique PX-associated domains, as well as a regulator of G protein-coupled receptor signaling (RGS) domain that attenuates Gαs-coupled G protein-coupled receptor signaling. Here we delineate the structural organization of these RGS-PX proteins, revealing a protein family with a modular architecture that is conserved in all eukaryotes. The one exception to this is mammalian SNX19, which lacks the typical RGS structure but preserves all other domains. The PX domain is a sensor of membrane phosphoinositide lipids and we find that specific sequence alterations in the PX domains of the mammalian RGS-PX proteins, SNX13, SNX14, SNX19, and SNX25, confer differential phosphoinositide binding preferences. Although SNX13 and SNX19 PX domains bind the early endosomal lipid phosphatidylinositol 3-phosphate, SNX14 shows no membrane binding at all. Crystal structures of the SNX19 and SNX14 PX domains reveal key differences, with alterations in SNX14 leading to closure of the binding pocket to prevent phosphoinositide association. Our findings suggest a role for alternative membrane interactions in spatial control of RGS-PX proteins in cell signaling and trafficking.

Indexed as

Amino Acid SequenceAnimalsBinding SitesCell MovementConserved SequenceCrystallography, X-RayEndosomesEscherichia coliGene ExpressionGene Expression RegulationGTP-Binding ProteinsHeLa CellsHumansMiceModels, MolecularMolecular Sequence DataGTP-Binding Proteinsphosphatidylinositol 3-phosphatePhosphatidylinositol PhosphatesRecombinant Fusion ProteinsSNX14 protein, humanSnx19 protein, mouseSorting NexinsCell SignalingEndosomeG Protein-coupled Receptor (GPCR)Membrane TraffickingPhosphatidylinositolPhox Homology DomainRegulator of G Protein Signaling (RGS)Scaffold proteinSorting NexinX-ray Crystallography

Identifiers

PMID25148684
PMCPMC4192506
OpenAlexW2097088669

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.