Evidence map›Paper›PMID 25148268›Full record

ArticleBiochemistry2014

Crystal structures of the F and pSLT plasmid TraJ N-terminal regions reveal similar homodimeric PAS folds with functional interchangeability.

Jun Lu, Ruiying Wu, Joshua N Adkins, Andrzej Joachimiak, J N Mark Glover

Abstract read
In one paragraph

Article in Biochemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

5 authors.

Jun LuDepartment of Biochemistry, University of Alberta , Edmonton, Alberta T6G 2H7, Canada.
Ruiying Wu
Joshua N Adkins
Andrzej Joachimiak
J N Mark Glover

Funding

Midwest Center for Structural GenomicsU54GM094585 · NIGMS · UNIVERSITY OF CHICAGO · PI MINOR, WLADEK · 2010 to 2014
$33.7M
Consortia for High-Throughput-Enabled Structural Biology Partnerships (U01)U01GM094623 · NIGMS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI ADKINS, JOSHUA N. · 2010 to 2014
$5.2M
CIHR 42447NIGMS NIH HHS GM094585NIGMS NIH HHS GM094623NIGMS NIH HHS U01 GM094623NIGMS NIH HHS U54 GM094585
6 · The paper itself

Abstract

In the F family of conjugative plasmids, TraJ is an essential transcriptional activator of the tra operon that encodes most of the proteins required for conjugation. Here we report for the first time the X-ray crystal structures of the TraJ N-terminal domains from the prototypic F plasmid (TraJF(11-130)) and from the Salmonella virulence plasmid pSLT (TraJpSLT(1-128)). Both structures contain similar Per-ARNT-Sim (PAS) folds, which further homodimerize through the N-terminal helix and the structurally conserved β-sheet of the PAS fold from each protomer. Mutational analysis reveals that the observed dimeric interface is critical for TraJF transcriptional activation, indicating that dimerization of TraJ is required for its in vivo function. TraJ is specific in activating its cognate tra operon promoter; however, heterologous PAS domains from pSLT and R100 TraJ can functionally replace the TraJF PAS domain, suggesting that the allelic specificity of TraJ is solely mediated by the region C-terminal to the PAS domain.

Indexed as

PlasmidsAmino Acid SequenceBacterial Outer Membrane ProteinsCrystallography, X-RayCulture MediaDimerizationModels, MolecularMolecular Sequence DataProtein ConformationProtein FoldingSalmonellaSequence Homology, Amino AcidVirulenceBacterial Outer Membrane ProteinsCulture MediaTraJ protein, bacteria

Identifiers

PMID25148268
PMCPMC4165441

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.