Evidence map›Paper›PMID 25148080›Full record

ArticlePloS one2014

Identification of miRNAs differentially expressed in human epilepsy with or without granule cell pathology.

Silvia Zucchini, Gianluca Marucci, Beatrice Paradiso, Giovanni Lanza, Paolo Roncon, Pierangelo Cifelli, Manuela Ferracin, Marco Giulioni, Roberto Michelucci, Guido Rubboli and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 40 citations in OpenAlex.

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  6. From fix to fit into the autoptic human brains.European journal of histochemistry : EJH · 2018
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  19. miRNAs: biological and clinical determinants in epilepsy.Frontiers in molecular neuroscience · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Silvia ZucchiniDepartment of Medical Sciences, Section of Pharmacology and Neuroscience Center, University of Ferrara, Ferrara, Italy; National Institute of Neuroscience, Torino, Italy; Laboratory for Technologies of Advanced Therapies (LTTA), University of Ferrara, Ferrara, Italy.
Gianluca MarucciDepartment of Biomedical and NeuroMotor Sciences (DiBiNeM), Section of Pathology, Bellaria Hospital, Bologna, Italy.
Beatrice ParadisoDepartment of Medical Sciences, Section of Pharmacology and Neuroscience Center, University of Ferrara, Ferrara, Italy; National Institute of Neuroscience, Torino, Italy; Department of Morphology, Surgery and Experimental Medicine, Section of Pathology, University of Ferrara, Ferrara, Italy.
Giovanni LanzaDepartment of Morphology, Surgery and Experimental Medicine, Section of Pathology, University of Ferrara, Ferrara, Italy.
Paolo RonconDepartment of Medical Sciences, Section of Pharmacology and Neuroscience Center, University of Ferrara, Ferrara, Italy; National Institute of Neuroscience, Torino, Italy.
Pierangelo CifelliDepartment of Medical Sciences, Section of Pharmacology and Neuroscience Center, University of Ferrara, Ferrara, Italy; Ri.MED Foundation, Palermo, Italy.
Manuela FerracinLaboratory for Technologies of Advanced Therapies (LTTA), University of Ferrara, Ferrara, Italy; Department of Morphology, Surgery and Experimental Medicine, Section of Pathology, Oncology and Experimental Biology, University of Ferrara, Ferrara, Italy.
Marco GiulioniIRCCS Institute of Neurological Sciences, Section of Neurosurgery, Bellaria Hospital, Bologna, Italy.
Roberto MichelucciIRCCS Institute of Neurological Sciences, Section of Neurology, Bellaria Hospital, Bologna, Italy.
Guido RubboliIRCCS Institute of Neurological Sciences, Section of Neurology, Bellaria Hospital, Bologna, Italy; Danish Epilepsy Center, Epilepsihospital, Dianalund, Denmark.
Michele SimonatoDepartment of Medical Sciences, Section of Pharmacology and Neuroscience Center, University of Ferrara, Ferrara, Italy; National Institute of Neuroscience, Torino, Italy; Laboratory for Technologies of Advanced Therapies (LTTA), University of Ferrara, Ferrara, Italy.
University of Ferrara · ITInstitute of Neurological Sciences · ITNeuroscience Institute · ITOspedale Bellaria · ITRi.MED · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The microRNAs (miRNAs) are small size non-coding RNAs that regulate expression of target mRNAs at post-transcriptional level. miRNAs differentially expressed under pathological conditions may help identifying mechanisms underlying the disease and may represent biomarkers with prognostic value. However, this kind of studies are difficult in the brain because of the cellular heterogeneity of the tissue and of the limited access to fresh tissue. Here, we focused on a pathology affecting specific cells in a subpopulation of epileptic brains (hippocampal granule cells), an approach that bypasses the above problems. All patients underwent surgery for intractable temporal lobe epilepsy and had hippocampal sclerosis associated with no granule cell pathology in half of the cases and with type-2 granule cell pathology (granule cell layer dispersion or bilamination) in the other half. The expression of more than 1000 miRNAs was examined in the laser-microdissected dentate granule cell layer. Twelve miRNAs were differentially expressed in the two groups. One of these, miR487a, was confirmed to be expressed at highly differential levels in an extended cohort of patients, using RT-qPCR. Bioinformatics searches and RT-qPCR verification identified ANTXR1 as a possible target of miR487a. ANTXR1 may be directly implicated in granule cell dispersion because it is an adhesion molecule that favors cell spreading. Thus, miR487a could be the first identified element of a miRNA signature that may be useful for prognostic evaluation of post-surgical epilepsy and may drive mechanistic studies leading to the identification of therapeutic targets.

Indexed as

Gene Expression RegulationAdultCluster AnalysisDrug ResistanceEpilepsyEpilepsy, Temporal LobeFemaleGene Expression ProfilingHumansMaleMicrofilament ProteinsMicroRNAsMiddle AgedNeoplasm ProteinsReceptors, Cell SurfaceRNA InterferenceANTXR1 protein, humanMicrofilament ProteinsMicroRNAsMIRN487 microRNA, humanNeoplasm ProteinsReceptors, Cell SurfaceRNA, Messenger

Identifiers

PMID25148080
PMCPMC4141756
OpenAlexW2041366549

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.