Evidence map›Paper›PMID 25148022›Full record

ArticleImmunity2014

Revisiting thymic positive selection and the mature T cell repertoire for antigen.

Nienke Vrisekoop, João P Monteiro, Judith N Mandl, Ronald N Germain

Open access · bronzeAbstract read
In one paragraph

Article in Immunity, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 87 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
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  5. Review
  6. The partitioning of TCR repertoires by thymic selection.The Journal of experimental medicine · 2024
    Review
  7. A journey to your self: The vague definition of immune self and its practical implications.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
  9. Markers and makers of NKT17 cells.Experimental & molecular medicine · 2023
    Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Self-mediated positive selection of T cells sets an obstacle to the recognition of nonself.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Article
  17. Review
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Nienke VrisekoopDepartment of Respiratory Medicine, Laboratory of Translational Immunology, University Medical Center Utrecht, 3584 CT Utrecht, the Netherlands.
João P MonteiroLymphocyte Biology Section, Laboratory of Systems Biology, National Institute of Allergy and Infectious Diseases, NIH, Bethesda, MD 20892, USA.
Judith N MandlLymphocyte Biology Section, Laboratory of Systems Biology, National Institute of Allergy and Infectious Diseases, NIH, Bethesda, MD 20892, USA. Electronic address: mandlj@niaid.nih.gov.
Ronald N GermainLymphocyte Biology Section, Laboratory of Systems Biology, National Institute of Allergy and Infectious Diseases, NIH, Bethesda, MD 20892, USA. Electronic address: rgermain@nih.gov.
National Institute of Allergy and Infectious Diseases · USUniversity Medical Center Utrecht · NL

Funding

Functional Biology Of T CellsZIAAI000758 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI GERMAIN, RONALD N · 2009 to 2025
$15.4M
Analysis Of T Cell Receptor Structure And FunctionZIAAI000403 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI GERMAIN, RONALD N · 2009 to 2015
$2.5M
Intramural NIH HHS ZIA AI000403Intramural NIH HHS ZIA AI000758
6 · The paper itself

Abstract

To support effective host defense, the T cell repertoire must balance breadth of recognition with sensitivity for antigen. The concept that T lymphocytes are positively selected in the thymus is well established, but how this selection achieves such a repertoire has not been resolved. Here we suggest that it is direct linkage between self and foreign antigen recognition that produces the necessary blend of TCR diversity and specificity in the mature peripheral repertoire, enabling responses to a broad universe of unpredictable antigens while maintaining an adequate number of highly sensitive T cells in a population of limited size. Our analysis also helps to explain how diversity and frequency of antigen-reactive cells in a T cell repertoire are adjusted in animals of vastly different size scale to enable effective antipathogen responses and suggests a possible binary architecture in the TCR repertoire that is divided between germline-related optimal binding and diverse recognition.

Indexed as

Adaptive ImmunityAnimalsCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesCell DifferentiationEpitopesHistocompatibility Antigens Class IIHumansMiceReceptors, Antigen, T-Cell, alpha-betaThymus GlandEpitopesHistocompatibility Antigens Class IIReceptors, Antigen, T-Cell, alpha-beta

Identifiers

PMID25148022
PMCPMC4152861
OpenAlexW2081770315

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.