Evidence map›Paper›PMID 25147180›Full record

ArticleThe Journal of biological chemistry2014

Fucosylated chondroitin sulfates from the body wall of the sea cucumber Holothuria forskali: conformation, selectin binding, and biological activity.

Charalampos G Panagos, Derek S Thomson, Claire Moss, Adam D Hughes, Maeve S Kelly, Yan Liu, Wengang Chai, Radhakrishnan Venkatasamy, Domenico Spina, Clive P Page and 5 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 101 citations in OpenAlex.

  1. Article
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  13. Article
  14. Galactosaminoglycans: Medical Applications and Drawbacks.Molecules (Basel, Switzerland) · 2019
    Review
  15. Article
  16. Article
  17. Review
  18. Pharmacological Potential of Sea Cucumbers.International journal of molecular sciences · 2018
    Review
  19. The Role of Heparan Sulfate in Inflammation, and the Development of Biomimetics as Anti-Inflammatory Strategies.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2018
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 3 countries.

Charalampos G PanagosFrom the EaStCHEM School of Chemistry, Joseph Black Building, The King's Buildings, University of Edinburgh, Edinburgh EH9 3JJ, United Kingdom.
Derek S ThomsonGlycoMar Ltd., European Centre for Marine Biotechnology, Dunstaffnage Marine Laboratory, Oban, Argyll PA37 1QA, United Kingdom.
Claire MossGlycoMar Ltd., European Centre for Marine Biotechnology, Dunstaffnage Marine Laboratory, Oban, Argyll PA37 1QA, United Kingdom.
Adam D Hughesthe Scottish Association for Marine Science, Scottish Marine Institute, Oban, Argyll PA37 1QA, United Kingdom.
Maeve S Kellythe Scottish Association for Marine Science, Scottish Marine Institute, Oban, Argyll PA37 1QA, United Kingdom.
Yan Liuthe Glycosciences Laboratory, Hammersmith Campus, Imperial College London, London W12 0NN, United Kingdom.
Wengang Chaithe Glycosciences Laboratory, Hammersmith Campus, Imperial College London, London W12 0NN, United Kingdom.
Radhakrishnan Venkatasamythe Sackler Institute of Pulmonary Pharmacology, Institute of Pharmaceutical Science, King's College London, London SE1 9NH, United Kingdom.
Domenico Spinathe Sackler Institute of Pulmonary Pharmacology, Institute of Pharmaceutical Science, King's College London, London SE1 9NH, United Kingdom.
Clive P Pagethe Sackler Institute of Pulmonary Pharmacology, Institute of Pharmaceutical Science, King's College London, London SE1 9NH, United Kingdom.
John Hogwoodthe National Institute of Biological Standards and Controls, South Mimms, Potters Bar, Hertfordshire EN6 3QG, United Kingdom.
Robert J Woodsthe Complex Carbohydrate Research Center, the University of Georgia, Athens, Georgia 30602, and the School of Chemistry, National University of Ireland Galway, University Road, Galway, Ireland.
Barbara Mulloythe Glycosciences Laboratory, Hammersmith Campus, Imperial College London, London W12 0NN, United Kingdom, the Sackler Institute of Pulmonary Pharmacology, Institute of Pharmaceutical Science, King's College London, London SE1 9NH, United Kingdom.
Charlie D BavingtonGlycoMar Ltd., European Centre for Marine Biotechnology, Dunstaffnage Marine Laboratory, Oban, Argyll PA37 1QA, United Kingdom.
Dušan UhrínFrom the EaStCHEM School of Chemistry, Joseph Black Building, The King's Buildings, University of Edinburgh, Edinburgh EH9 3JJ, United Kingdom, dusan.uhrin@ed.ac.uk.
GlycoMar (United Kingdom) · GBImperial College London · GBKing's College London · GBScottish Association For Marine Science · GBUniversity of Edinburgh · GBNational Institute for Biological Standards and Control · GBUniversity of Georgia · US

Funding

TR&D3. Approaches to Proteoglycan Function at Biochemical and Cellular LevelsP41GM103390 · NIGMS · UNIVERSITY OF GEORGIA · PI BOONS, GEERT-JAN · 2012 to 2019
$14.5M
Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
Integrating Experiment and Theory to Characterize Diagnostic Antibody SpecificityR01GM094919 · NIGMS · UNIVERSITY OF GEORGIA · PI WOODS, ROBERT J · 2010 to 2013
$1.7M
NIGMS NIH HHS P41 GM103311NIGMS NIH HHS P41 GM103390NIGMS NIH HHS R01 GM094919Wellcome TrustWellcome Trust 093533/Z/10/Z
6 · The paper itself

Abstract

Fucosylated chondroitin sulfate (fCS) extracted from the sea cucumber Holothuria forskali is composed of the following repeating trisaccharide unit: → 3)GalNAcβ4,6S(1 → 4) [FucαX(1 → 3)]GlcAβ(1 →, where X stands for different sulfation patterns of fucose (X = 3,4S (46%), 2,4S (39%), and 4S (15%)). As revealed by NMR and molecular dynamics simulations, the fCS repeating unit adopts a conformation similar to that of the Le(x) blood group determinant, bringing several sulfate groups into close proximity and creating large negative patches distributed along the helical skeleton of the CS backbone. This may explain the high affinity of fCS oligosaccharides for L- and P-selectins as determined by microarray binding of fCS oligosaccharides prepared by Cu(2+)-catalyzed Fenton-type and photochemical depolymerization. No binding to E-selectin was observed. fCS poly- and oligosaccharides display low cytotoxicity in vitro, inhibit human neutrophil elastase activity, and inhibit the migration of neutrophils through an endothelial cell layer in vitro. Although the polysaccharide showed some anti-coagulant activity, small oligosaccharide fCS fragments had much reduced anticoagulant properties, with activity mainly via heparin cofactor II. The fCS polysaccharides showed prekallikrein activation comparable with dextran sulfate, whereas the fCS oligosaccharides caused almost no effect. The H. forskali fCS oligosaccharides were also tested in a mouse peritoneal inflammation model, where they caused a reduction in neutrophil infiltration. Overall, the data presented support the action of fCS as an inhibitor of selectin interactions, which play vital roles in inflammation and metastasis progression. Future studies of fCS-selectin interaction using fCS fragments or their mimetics may open new avenues for therapeutic intervention.

Indexed as

AnimalsAnti-Inflammatory Agents, Non-SteroidalCarbohydrate ConformationChondroitin SulfatesHydrogen PeroxideImmune System DiseasesIronLeukocyte DisordersLeukocyte ElastaseL-SelectinMiceModels, MolecularMolecular Sequence DataNeutrophil InfiltrationNeutrophilsOxidation-ReductionAnti-Inflammatory Agents, Non-SteroidalChondroitin SulfatesFenton's reagentfucosylated chondroitin sulfateHydrogen PeroxideIronLeukocyte ElastaseL-SelectinProteinase Inhibitory Proteins, SecretoryP-SelectinCarbohydrate-binding ProteinCarbohydrate StructureGAGGlycosaminoglycanInflammationMicroarrayMolecular DynamicsNuclear Magnetic Resonance (NMR)Selectin

Identifiers

PMID25147180
PMCPMC4192483
OpenAlexW2026405749

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.