Evidence map›Paper›PMID 25144218›Full record

ArticleAIDS (London, England)2014

Independent assessment of candidate HIV incidence assays on specimens in the CEPHIA repository.

Reshma Kassanjee, Christopher D Pilcher, Sheila M Keating, Shelley N Facente, Elaine McKinney, Matthew A Price, Jeffrey N Martin, Susan Little, Frederick M Hecht, Esper G Kallas and 4 more

Abstract readComparative StudyEvaluation Study
In one paragraph

Article in AIDS (London, England), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 101 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
101citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

101 citing papers in PubMed, 2 syntheses or guidelines pooled it.

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41 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Reshma KassanjeeaThe South African DST/NRF Centre of Excellence in Epidemiological Modelling and Analysis (SACEMA), Stellenbosch University, Stellenbosch bSchool of Computational and Applied Mathematics, University of the Witwatersrand, Johannesburg, South Africa cUniversity of California, San Francisco dBlood Systems Research Institute, San Francisco, California, USA ePublic Health England, London, UK fInternational AIDS Vaccine Initiative (IAVI), Department of Medical Affairs, New York City, New York gUniversity of California San Diego, Department of Medicine, San Diego, California, USA hDivision of Clinical Immunology and Allergy, School of Medicine, University of São Paulo, São Paulo, Brazil.
Christopher D Pilcher
Sheila M Keating
Shelley N Facente
Elaine McKinney
Matthew A Price
Jeffrey N Martin
Susan Little
Frederick M Hecht
Esper G Kallas
Alex Welte
Michael P Busch
Gary Murphy
Consortium for the Evaluation and Performance of HIV Incidence Assays (CEPHIA)

Funding

Unsolicited R24 for the CFAR-Network of Integrated Clinical Sciences, CNICSR24AI067039 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Michael S. Saag · 2006 to 2026
$99.4M
Virology CoreP30AI027763 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MALLORY O JOHNSON · 1988 to 2026
$93.6M
Transmission ProbabilityP01AI074621 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LITTLE, SUSAN JANET · 2008 to 2012
$23.1M
Primary Infection Resource Consortium (PIRC)R24AI106039 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LITTLE, SUSAN JANET · 2013 to 2021
$23.1M
Southern California Primary Infection ProgramU01AI043638 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI RICHMAN, DOUGLAS D · 1998 to 2010
$21.3M
Transmission and Persistence of CTL and Drug Resistance MutationsP01AI071713 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HECHT, FREDERICK M · 2007 to 2011
$14.3M
Efficacy of ART to Interrupt HIV Transmission NetworksR01MH100974 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LITTLE, SUSAN JANET · 2014 to 2018
$3.2M
Host Factors Influencing HIV Viral Load and Infectivity in SemenR01HD074511 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PILCHER, CHRISTOPHER D · 2012 to 2016
$3.1M
A Pilot of Intervention to Promote Acute HIV Testing by Ambulatory Care ProvidersR34MH096606 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PILCHER, CHRISTOPHER D · 2012 to 2014
$693k
NIAID NIH HHS AI106039NIAID NIH HHS AI43638NIAID NIH HHS AI74621NIAID NIH HHS P01 AI071713NIAID NIH HHS P30 AI027763NIAID NIH HHS R24 AI067039NIAID NIH HHS R24 AI106039NICHD NIH HHS R01 HD074511NIMH NIH HHS R01 MH100974NIMH NIH HHS R34 MH096606
6 · The paper itself

Abstract

objectiveCross-sectional HIV incidence surveillance, using assays that distinguish 'recent' from 'nonrecent' infections, has been hampered by inadequate performance and characterization of incidence assays. In this study, the Consortium for the Evaluation and Performance of HIV Incidence Assays presents results of the first independent evaluation of five incidence assays (BED, Limiting Antigen Avidity, Less-sensitive Vitros, Vitros Avidity and BioRad Avidity).

designA large repository of diverse specimens from HIV-positive patients was established, multiple assays were run on 2500 selected specimens, and data were analyzed to estimate assay characteristics relevant for incidence surveillance.

methodsThe mean duration of recent infection (MDRI, average time 'recent' while infected for less than some time cut-off T) was estimated from longitudinal data on seroconverters by regression. The false-recent rate (FRR, probability of testing 'recent' when infected for longer than T) was explored by measuring the proportions of 'recent' results in various subsets of patients.

resultsAssays continue to fail to attain the simultaneously large MDRI and small FRR demanded by existing performance guidelines. All assays produce high FRRs amongst virally suppressed patients (>40%), including elite controllers and treated patients.

conclusionsResults from this first independent evaluation provide valuable information about the current performance of assays, and suggest the need for further optimization. Variation of 'recent'/'nonrecent' thresholds and the use of multiple antibody-maturation assays, as well as other biomarkers, can now be explored, using the rich data generated by the Consortium for the Evaluation and Performance of HIV Incidence Assays. Consistently high FRRs amongst those virally suppressed suggest that viral load will be a particularly valuable supplementary marker.

Indexed as

Epidemiologic MethodsClinical Laboratory TechniquesHIV InfectionsHumansIncidence

Identifiers

PMID25144218
PMCPMC4210690

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.