Evidence map›Paper›PMID 25143868›Full record

ArticleAmerican journal of clinical and experimental immunology2014

Dominant B-cell epitopes from cancer/stem cell antigen SOX2 recognized by serum samples from cancer patients.

Julia Shih, Munira Rahman, Quang T Luong, Shirley H Lomeli, Joseph Riss, Robert M Prins, Ali O Gure, Gang Zeng

Open access · greenAbstract read
In one paragraph

Article in American journal of clinical and experimental immunology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Immune evasion by cancer stem cells.Regenerative therapy · 2021
    Review
  2. Optimizing peptide epitope-based autoantibody detection in cancer patients.American journal of clinical and experimental immunology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Julia ShihDepartment of Urology, David Geffen School of Medicine at UCLA Los Angeles, CA 90095, USA.
Munira RahmanWestern University of Health Sciences Pomona, CA 91766, USA.
Quang T LuongDepartment of Medicine, David Geffen School of Medicine at UCLA Los Angeles, CA 90095, USA.
Shirley H LomeliDepartment of Urology, David Geffen School of Medicine at UCLA Los Angeles, CA 90095, USA.
Joseph RissDepartment of Urology, David Geffen School of Medicine at UCLA Los Angeles, CA 90095, USA.
Robert M PrinsDepartment of Neurosurgery, David Geffen School of Medicine at UCLA Los Angeles, CA 90095, USA.
Ali O GureDepartment of Molecular Biology and Genetics, Bilkent University Ankara 06800, Turkey.
Gang ZengDepartment of Urology, David Geffen School of Medicine at UCLA Los Angeles, CA 90095, USA.
University of California, Los Angeles · USBilkent University · TRWestern University of Health Sciences · US

Funding

Women's CancersP30CA016042 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Samuel Wheeler French · 1985 to 2026
$134.5M
A+PSA Assay for Improved Prostate Cancer Diagnosis and Risk AssessmentR01CA164388 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ZENG, GANG · 2012 to 2015
$1.4M
NCI NIH HHS P30 CA016042NCI NIH HHS R01 CA164388
6 · The paper itself

Abstract

Human sex determining region Y-box 2 (SOX2) is an important transcriptional factor involved in the pluripotency and stemness of human embryonic stem cells. SOX2 plays important roles in maintaining cancer stem cell activities of melanoma and cancers of the brain, prostate, breast, and lung. SOX2 is also a lineage survival oncogene for squamous cell carcinoma of the lung and esophagus. Spontaneous cellular and humoral immune responses against SOX2 present in cancer patients classify it as a tumor-associated antigen (TAA) shared by lung cancer, glioblastoma, and prostate cancer among others. In this study, B-cell epitopes were predicted using computer-assisted algorithms. Synthetic peptides based on the prediction were screened for recognition by serum samples from cancer patients using ELISA. Two dominant B-cell epitopes, SOX2:52-87 and SOX2:98-124 were identified. Prostate cancer, glioblastoma and lung cancer serum samples that recognized the above SOX2 epitopes also recognized the full-length protein based on Western blot. These B-cell epitopes may be used in assessing humoral immune responses against SOX2 in cancer immunotherapy and stem cell-related transplantation.

Indexed as

autoantibodybiomarkerscancer stem celliPS cellpluripotent stem cell

Identifiers

PMID25143868
PMCPMC4138131
OpenAlexW1455263190

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.