Evidence map›Paper›PMID 25143574›Full record

ArticleJournal of clinical microbiology2014

Major intercontinentally distributed sequence types of Kingella kingae and development of a rapid molecular typing tool.

Romain Basmaci, Philippe Bidet, Pablo Yagupsky, Carmen Muñoz-Almagro, Nataliya V Balashova, Catherine Doit, Stéphane Bonacorsi

Open access · bronzeAbstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
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  3. Infective Endocarditis Due toMicroorganisms · 2024
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  6. Pharyngeal Colonization byMicroorganisms · 2022
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  7. Pathogenic determinants ofFrontiers in pediatrics · 2022
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  8. First report ofThe Pan African medical journal · 2022
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  9. Review
  10. Article
  11. CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne · 2017
    Article
  12. Article
  13. Acute Septic Arthritis of the Knee Caused byFrontiers in pediatrics · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Kingella kingae: carriage, transmission, and disease.Clinical microbiology reviews · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 4 countries.

Romain BasmaciIAME, UMR 1137, INSERM, Paris, France IAME, UMR 1137, University Paris Diderot, Sorbonne Paris Cité, Paris, France AP-HP, Laboratoire de Microbiologie, Hôpital Robert-Debré, Paris, France.
Philippe BidetIAME, UMR 1137, INSERM, Paris, France IAME, UMR 1137, University Paris Diderot, Sorbonne Paris Cité, Paris, France AP-HP, Laboratoire de Microbiologie, Hôpital Robert-Debré, Paris, France.
Pablo YagupskyClinical Microbiology Laboratory, Soroka University Medical Center, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Carmen Muñoz-AlmagroDepartamento de Microbiología Molecular, Hospital Universitario Sant Joan de Déu, Barcelona, Spain.
Nataliya V BalashovaDepartment of Pathology, School of Dental Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Catherine DoitIAME, UMR 1137, INSERM, Paris, France IAME, UMR 1137, University Paris Diderot, Sorbonne Paris Cité, Paris, France AP-HP, Laboratoire de Microbiologie, Hôpital Robert-Debré, Paris, France.
Stéphane BonacorsiIAME, UMR 1137, INSERM, Paris, France IAME, UMR 1137, University Paris Diderot, Sorbonne Paris Cité, Paris, France AP-HP, Laboratoire de Microbiologie, Hôpital Robert-Debré, Paris, France stephane.bonacorsi@rdb.aphp.fr.
Délégation Paris 7 · FRBen-Gurion University of the Negev · ILHospital Sant Joan de Déu Barcelona · ESInserm · FRSorbonne Paris Cité · FRUniversity of Pennsylvania · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although Kingella kingae is the most common etiology of osteoarticular infections in young children, is a frequent cause of bacteremia in those younger than 4 years, and has been involved in clusters of invasive infections among daycare center attendees, the population structure of the species has not been systematically studied. Using multilocus sequence typing, we investigated the genetic diversity of the largest intercontinental collection of K. kingae strains to date. To facilitate typing of bacterial isolates, we developed a novel genotyping tool that targets the DNA uptake sequence (DUS). Among 324 strains isolated from asymptomatic carriers and patients from Israel, Europe, North America, and Australia with various invasive forms of the disease from 1960 to 2013, we identified 64 sequence types (STs) and 12 ST complexes (STcs). Five predominant STcs, comprising 72.2% of all strains, were distributed intercontinentally. ST-6 was the most frequent, showing a worldwide distribution, and appeared genotypically isolated by exhibiting few neighboring STs, suggesting an optimal fitness. ST-14 and ST-23 appeared to be the oldest groups of bacteria, while ST-25 probably emerged more recently from the highly evolutive ST-23. Using the DUS typing method, randomly chosen isolates were correctly classified to one of the major STcs. The comprehensive description of K. kingae evolution would help to detect new emerging clones and decipher virulence and fitness mechanisms. The rapid and reproducible DUS typing method may serve in the initial investigation of K. kingae outbreaks.

Indexed as

Genetic VariationAustraliaChild, PreschoolCluster AnalysisEuropeGenotypeHumansInfantIsraelKingella kingaeMolecular EpidemiologyMultilocus Sequence TypingNeisseriaceae InfectionsNorth AmericaOsteoarthritisReproducibility of Results

Identifiers

PMID25143574
PMCPMC4313220
OpenAlexW2060398994

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.