Evidence map›Paper›PMID 25142072›Full record

ArticleRetrovirology2014

Replication competent virus as an important source of bias in HIV latency models utilizing single round viral constructs.

Pawel Bonczkowski, Ward De Spiegelaere, Alberto Bosque, Cory H White, Anouk Van Nuffel, Eva Malatinkova, Maja Kiselinova, Wim Trypsteen, Wojciech Witkowski, Jolien Vermeire and 5 more

Abstract read
In one paragraph

Article in Retrovirology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. The Cultured TMethods in molecular biology (Clifton, N.J.) · 2022
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Pawel Bonczkowski
Ward De Spiegelaere
Alberto Bosque
Cory H White
Anouk Van Nuffel
Eva Malatinkova
Maja Kiselinova
Wim Trypsteen
Wojciech Witkowski
Jolien Vermeire
Bruno Verhasselt
Laura Martins
Christopher H Woelk
Vicente Planelles
Linos Vandekerckhove

Funding

VirologyP30AI036214 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Maile Ann Young Karris · 1994 to 2026
$78.4M
Using NK Cells to eliminate the latent HIV reservoirU19AI096113 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WOELK, CHRISTOPHER H · 2011 to 2015
$39.5M
An Ex Vivo Model of HIV-1 Latency and Reactivation using Primary Memory CellsR01AI087508 · NIAID · UNIVERSITY OF UTAH · PI PLANELLES, VICENTE · 2010 to 2014
$1.8M
Synthetic Molecular Sensors to Target Latently Infected Cells for HIV EradicationR33AI104282 · NIAID · VETERANS MEDICAL RESEARCH FDN/SAN DIEGO · PI LOONEY, DAVID JAMES · 2016 to 2018
$1.3M
Synthetic Molecular Sensors to Target Latently Infected Cells for HIV EradicationR21AI104282 · NIAID · VETERANS MEDICAL RESEARCH FDN/SAN DIEGO · PI WOELK, CHRISTOPHER H · 2013 to 2014
$299k
NIAID NIH HHS AI036214NIAID NIH HHS AI087508NIAID NIH HHS AI096113NIAID NIH HHS AI104282NIAID NIH HHS P30 AI036214NIAID NIH HHS R01 AI087508NIAID NIH HHS R21 AI104282NIAID NIH HHS R33 AI104282NIAID NIH HHS U19 AI096113
6 · The paper itself

Abstract

The central memory T cell (TCM) model forms a unique HIV-1 latency model based on primary cells that closely resemble in vivo TCM. The virus employed in this model is based on an engineered vector incapable of replication after initial infection. We show that despite this strategy, replication competent viral particles are released into the culture medium due to recombination between overlapping sequences of the env deleted HIV genome that is co-transfected with intact env. This finding emphasizes the need for careful data analysis and interpretation if similar constructs are employed and urges for additional caution during laboratory work.

Indexed as

Virus LatencyCD4-Positive T-LymphocytesDNA, ViralGenes, envGenetic VectorsHIV-1HIV InfectionsHumansVirus ReplicationDNA, Viral

Identifiers

PMID25142072
PMCPMC4156640

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.