Evidence map›Paper›PMID 25140425›Full record

ArticleBiophysical journal2014

Membrane interactions of phylloseptin-1, -2, and -3 peptides by oriented solid-state NMR spectroscopy.

Jarbas M Resende, Rodrigo M Verly, Christopher Aisenbrey, Amary Cesar, Philippe Bertani, Dorila Piló-Veloso, Burkhard Bechinger

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 43 citations in OpenAlex.

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  12. Ocellatin peptides from the skin secretion of the South American frogThe journal of venomous animals and toxins including tropical diseases · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Jarbas M ResendeUniversidade Federal de Minas Gerais, Departamento de Química, Belo Horizonte, MG, Brazil; Université de Strasbourg/CNRS, UMR7177, Institut de Chimie, Strasbourg, France.
Rodrigo M VerlyUniversidade Federal de Minas Gerais, Departamento de Química, Belo Horizonte, MG, Brazil; Universidade Federal do Vales do Jequitinhonha e Mucuri, Diamantina, MG, Brazil.
Christopher AisenbreyUniversité de Strasbourg/CNRS, UMR7177, Institut de Chimie, Strasbourg, France.
Amary CesarUniversidade Federal de Minas Gerais, Departamento de Química, Belo Horizonte, MG, Brazil.
Philippe BertaniUniversité de Strasbourg/CNRS, UMR7177, Institut de Chimie, Strasbourg, France.
Dorila Piló-VelosoUniversidade Federal de Minas Gerais, Departamento de Química, Belo Horizonte, MG, Brazil.
Burkhard BechingerUniversité de Strasbourg/CNRS, UMR7177, Institut de Chimie, Strasbourg, France. Electronic address: bechinge@unistra.fr.
Institut de Chimie de Strasbourg · FRUniversidade Federal de Minas Gerais · BRUniversidade Federal dos Vales do Jequitinhonha e Mucuri · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phylloseptin-1, -2, and -3 are three members of the family of linear cationic antimicrobial peptides found in tree frogs. The highly homologous peptides encompass 19 amino acids, and only differ in the amino acid composition and charge at the six most carboxy-terminal residues. Here, we investigated how such subtle changes are reflected in their membrane interactions and how these can be correlated to their biological activities. To this end, the three peptides were labeled with stable isotopes, reconstituted into oriented phospholipid bilayers, and their detailed topology determined by a combined approach using (2)H and (15)N solid-state NMR spectroscopy. Although phylloseptin-2 and -3 adopt perfect in-plane alignments, the tilt angle of phylloseptin-1 deviates by 8° probably to assure a more water exposed localization of the lysine-17 side chain. Furthermore, different azimuthal angles are observed, positioning the amphipathic helices of all three peptides with the charged residues well exposed to the water phase. Interestingly, our studies also reveal that two orientation-dependent (2)H quadrupolar splittings from methyl-deuterated alanines and one (15)N amide chemical shift are sufficient to unambiguously determine the topology of phylloseptin-1, where quadrupolar splittings close to the maximum impose the most stringent angular restraints. As a result of these studies, a strategy is proposed where the topology of a peptide structure can be determined accurately from the labeling with (15)N and (2)H isotopes of only a few amino acid residues.

Indexed as

Antimicrobial Cationic PeptidesComputer SimulationDeuteriumLipid BilayersMagnetic Resonance SpectroscopyModels, ChemicalNitrogen RadioisotopesPhospholipidsAntimicrobial Cationic PeptidesDeuteriumLipid BilayersNitrogen RadioisotopesPhospholipidsphylloseptin-1, Phyllomedusaphylloseptin-2, Phyllomedusaphylloseptin-3, Phyllomedusa

Identifiers

PMID25140425
PMCPMC4142234
OpenAlexW2089656508

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.