Evidence map›Paper›PMID 25140167›Full record

ArticleFrontiers in microbiology2014

Grappling archaea: ultrastructural analyses of an uncultivated, cold-loving archaeon, and its biofilm.

Alexandra K Perras, Gerhard Wanner, Andreas Klingl, Maximilian Mora, Anna K Auerbach, Veronika Heinz, Alexander J Probst, Harald Huber, Reinhard Rachel, Sandra Meck and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. The cell biology of archaea.Nature microbiology · 2022
    Review
  5. Article
  6. Archaeal biofilm formation.Nature reviews. Microbiology · 2018
    Review
  7. Article
  8. Archaeal cell surface biogenesis.FEMS microbiology reviews · 2018
    Article
  9. Electron microscopic observations of prokaryotic surface appendages.Journal of microbiology (Seoul, Korea) · 2017
    Review
  10. Structure andeLife · 2017
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Alexandra K PerrasDepartment of Microbiology and Archaea Center, University of Regensburg Regensburg, Germany.
Gerhard WannerDepartment of Biology I, Biozentrum Ludwig Maximilian University of Munich Planegg-Martinsried, Germany.
Andreas KlinglDepartment of Biology I, Biozentrum Ludwig Maximilian University of Munich Planegg-Martinsried, Germany ; Zellbiologie, Philipps-Universität Marburg Marburg, Germany ; LOEWE Research Centre for Synthetic Microbiology (Synmikro) Marbug, Germany.
Maximilian MoraDepartment of Microbiology and Archaea Center, University of Regensburg Regensburg, Germany.
Anna K AuerbachDepartment of Microbiology and Archaea Center, University of Regensburg Regensburg, Germany.
Veronika HeinzDepartment of Microbiology and Archaea Center, University of Regensburg Regensburg, Germany.
Alexander J ProbstDepartment of Microbiology and Archaea Center, University of Regensburg Regensburg, Germany.
Harald HuberDepartment of Microbiology and Archaea Center, University of Regensburg Regensburg, Germany.
Reinhard RachelDepartment of Microbiology and Archaea Center, University of Regensburg Regensburg, Germany.
Sandra MeckDepartment of Microbiology and Archaea Center, University of Regensburg Regensburg, Germany.
Christine Moissl-EichingerDepartment of Microbiology and Archaea Center, University of Regensburg Regensburg, Germany.
University of Regensburg · DELoewe Center for Synthetic Microbiology · DELudwig-Maximilians-Universität München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Similarly to Bacteria, Archaea are microorganisms that interact with their surrounding environment in a versatile manner. To date, interactions based on cellular structure and surface appendages have mainly been documented using model systems of cultivable archaea under laboratory conditions. Here, we report on the microbial interactions and ultrastructural features of the uncultivated SM1 Euryarchaeon, which is highly dominant in its biotope. Therefore, biofilm samples taken from the Sippenauer Moor, Germany, were investigated via transmission electron microscopy (TEM; negative staining, thin-sectioning) and scanning electron microscopy (SEM) in order to elucidate the fine structures of the microbial cells and the biofilm itself. The biofilm consisted of small archaeal cocci (0.6 μm diameter), arranged in a regular pattern (1.0-2.0 μm distance from cell to cell), whereas each archaeon was connected to 6 other archaea on average. Extracellular polymeric substances (EPS) were limited to the close vicinity of the archaeal cells, and specific cell surface appendages (hami, Moissl et al., 2005) protruded beyond the EPS matrix enabling microbial interaction by cell-cell contacts among the archaea and between archaea and bacteria. All analyzed hami revealed their previously described architecture of nano-grappling hooks and barb-wire basal structures. Considering the archaeal cell walls, the SM1 Euryarchaea exhibited a double-membrane, which has rarely been reported for members of this phylogenetic domain. Based on these findings, the current generalized picture on archaeal cell walls needs to be revisited, as archaeal cell structures are more complex and sophisticated than previously assumed, particularly when looking into the uncultivated majority.

Indexed as

archaeabiofilmEPShamimicrobial interactionSEMTEMultrastructure

Identifiers

PMID25140167
PMCPMC4122167
OpenAlexW2000336670

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.