Evidence map›Paper›PMID 25138221›Full record

ArticleThe Journal of biological chemistry2014

Roles of Bacillus subtilis DprA and SsbA in RecA-mediated genetic recombination.

Tribhuwan Yadav, Begoña Carrasco, Ester Serrano, Juan C Alonso

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 60 citations in OpenAlex.

  1. Utilizing natural competence to genetically manipulateApplied and environmental microbiology · 2026
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  4. Review
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  7. Review
  8. Article
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  11. International journal of molecular sciences · 2023
    Article
  12. Article
  13. Cross-species microbial genome transfer: a Review.Frontiers in bioengineering and biotechnology · 2023
    Review
  14. Article
  15. Frontiers in microbiology · 2021
    Article
  16. Article
  17. Frontiers in microbiology · 2020
    Article
  18. Gene Transfer Agents in Symbiotic Microbes.Results and problems in cell differentiation · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Tribhuwan YadavFrom the Department of Microbial Biotechnology, Centro Nacional de Biotecnología, CSIC, 28049 Madrid, Spain.
Begoña CarrascoFrom the Department of Microbial Biotechnology, Centro Nacional de Biotecnología, CSIC, 28049 Madrid, Spain.
Ester SerranoFrom the Department of Microbial Biotechnology, Centro Nacional de Biotecnología, CSIC, 28049 Madrid, Spain.
Juan C AlonsoFrom the Department of Microbial Biotechnology, Centro Nacional de Biotecnología, CSIC, 28049 Madrid, Spain jcalonso@cnb.csic.es.
Centro Nacional de Biotecnología · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacillus subtilis competence-induced RecA, SsbA, SsbB, and DprA are required to internalize and to recombine single-stranded (ss) DNA with homologous resident duplex. RecA, in the ATP · Mg(2+)-bound form (RecA · ATP), can nucleate and form filament onto ssDNA but is inactive to catalyze DNA recombination. We report that SsbA or SsbB bound to ssDNA blocks the RecA filament formation and fails to activate recombination. DprA facilitates RecA filamentation; however, the filaments cannot engage in DNA recombination. When ssDNA was preincubated with SsbA, but not SsbB, DprA was able to activate DNA strand exchange dependent on RecA · ATP. This work demonstrates that RecA · ATP, in concert with SsbA and DprA, catalyzes DNA strand exchange, and SsbB is an accessory factor in the reaction. In contrast, RecA · dATP efficiently catalyzes strand exchange even in the absence of single-stranded binding proteins or DprA, and addition of the accessory factors marginally improved it. We proposed that the RecA-bound nucleotide (ATP and to a lesser extent dATP) might dictate the requirement for accessory factors.

Indexed as

Recombination, GeneticBacillus subtilisBacterial ProteinsDNA, BacterialDNA-Binding ProteinsDNA, Single-StrandedMembrane ProteinsRec A RecombinasesBacterial ProteinsDNA, BacterialDNA-Binding ProteinsDNA, Single-StrandedDprA protein, bacteriaMembrane ProteinsRec A RecombinasesDNA-binding ProteinDNA-Protein InteractionDNA RecombinationDNA TransformationProtein-DNA Interaction

Identifiers

PMID25138221
PMCPMC4183802
OpenAlexW2074231839

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.