Evidence map›Paper›PMID 25137013›Full record

ArticleACS chemical biology2014

Small-molecule inhibitors of SETD8 with cellular activity.

Gil Blum, Glorymar Ibáñez, Xiangjun Rao, David Shum, Constantin Radu, Hakim Djaballah, Judd C Rice, Minkui Luo

Abstract read
In one paragraph

Article in ACS chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Lysine and arginine methylation of transcription factors.Cellular and molecular life sciences : CMLS · 2024
    Review
  9. Article
  10. Article
  11. Article
  12. Methyltransferase SET domain family and its relationship with cardiovascular development and diseases.Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2022
    Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Gil BlumMolecular Pharmacology and Chemistry Program, ‡Tri-Institutional Training Program in Chemical Biology, and §HTS Core Facility, Memorial Sloan Kettering Cancer Center , New York, New York 10065, United States.
Glorymar Ibáñez
Xiangjun Rao
David Shum
Constantin Radu
Hakim Djaballah
Judd C Rice
Minkui Luo
University of Southern California · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Profile substrates and inhibitors of protein lysine methyltransferaseR01GM096056 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI LUO, MINKUI · 2011 to 2018
$3.2M
Enzyme-engineering Approaches to Dissect Protein Methylation ProfilesDP2OD007335 · OD · SLOAN-KETTERING INST CAN RESEARCH · PI LUO, MINKUI · 2010 to 2010
$2.9M
Interrogating Functions of Protein Methyltransferases with Chemical ToolsR01GM120570 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI LUO, MINKUI · 2016 to 2019
$1.8M
Molecular mechanisms of gene silencing by H4 methylationR01GM075094 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI RICE, JUDD C · 2007 to 2011
$1.5M
Developing High Throughput Assay to Identify Protein Methyltransferase InhibitorsR21NS071520 · NINDS · SLOAN-KETTERING INST CAN RESEARCH · PI LUO, MINKUI · 2010 to 2010
$191k
NCI NIH HHS 5P30 CA008748-44NCI NIH HHS P30 CA008748NIGMS NIH HHS 1R01GM096056NIGMS NIH HHS GM075094NIGMS NIH HHS R01 GM075094NIGMS NIH HHS R01 GM096056NIGMS NIH HHS R01 GM120570NIH HHS 1DP2-OD007335NIH HHS DP2 OD007335NINDS NIH HHS R21 NS071520NINDS NIH HHS R21NS071520
6 · The paper itself

Abstract

SETD8/SET8/Pr-SET7/KMT5A is the sole protein lysine methyltransferase (PKMT) known to monomethylate lysine 20 of histone H4 in vivo. SETD8's methyltransferase activity has been implicated in many essential cellular processes including DNA replication, DNA damage response, transcription modulation, and cell cycle regulation. Developing SETD8 inhibitors with cellular activity is a key step toward elucidating the diverse roles of SETD8 via convenient pharmacological perturbation. From the hits of a prior high throughput screen (HTS), SPS8I1-3 (NSC663284, BVT948, and ryuvidine) were validated as potent SETD8 inhibitors. These compounds contain different structural motifs and inhibit SETD8 via distinct modes. More importantly, these compounds show cellular activity by suppressing the H4K20me1 mark of SETD8 and recapitulate characteristic S/G2/M-phase cell cycle defects as observed for RNAi-mediated SETD8 knockdown. The commonality of SPS8I1-3 against SETD8, together with their distinct structures and mechanisms for SETD8 inhibition, argues for the collective application of these compounds as SETD8 inhibitors.

Indexed as

HEK293 CellsHigh-Throughput Screening AssaysHistone-Lysine N-MethyltransferaseHumansHistone-Lysine N-MethyltransferaseKMT5A protein, human

Identifiers

PMID25137013
PMCPMC4245162
OpenAlexW2317472577

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.