Evidence map›Paper›PMID 25136083›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

TIM-family proteins inhibit HIV-1 release.

Minghua Li, Sherimay D Ablan, Chunhui Miao, Yi-Min Zheng, Matthew S Fuller, Paul D Rennert, Wendy Maury, Marc C Johnson, Eric O Freed, Shan-Lu Liu

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 1 synthesis or guideline pooled it, 86 citations in OpenAlex.

  1. Pooled it
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  3. Review
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  5. Review
  6. Article
  7. Review
  8. Autophagy-mediated downregulation of AXL and TIM-1 promotes sustained Zika virus infection.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  16. SERINC5 counters retroviruses and non-retroviruses.Frontiers in cellular and infection microbiology · 2024
    Review
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  18. Article
  19. Article
  20. Review

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Minghua LiDepartment of Molecular Microbiology and Immunology, Bond Life Sciences Center, University of Missouri, Columbia, MO 65211;
Sherimay D AblanVirus-Cell Interaction Section, HIV Drug Resistance Program, National Cancer Institute-Frederick, Frederick, MD 21702;
Chunhui MiaoDepartment of Molecular Microbiology and Immunology, Bond Life Sciences Center, University of Missouri, Columbia, MO 65211;
Yi-Min ZhengDepartment of Molecular Microbiology and Immunology, Bond Life Sciences Center, University of Missouri, Columbia, MO 65211;
Matthew S FullerDepartment of Molecular Microbiology and Immunology, Bond Life Sciences Center, University of Missouri, Columbia, MO 65211;
Paul D RennertDepartment of Immunotherapy, SugarCone Biotech LLC, Holliston, MA 01746; and.
Wendy MauryDepartment of Microbiology, University of Iowa, Iowa City, IA 52245.
Marc C JohnsonDepartment of Molecular Microbiology and Immunology, Bond Life Sciences Center, University of Missouri, Columbia, MO 65211;
Eric O FreedVirus-Cell Interaction Section, HIV Drug Resistance Program, National Cancer Institute-Frederick, Frederick, MD 21702;
Shan-Lu LiuDepartment of Molecular Microbiology and Immunology, Bond Life Sciences Center, University of Missouri, Columbia, MO 65211; liushan@missouri.edu.
University of Missouri · USNational Cancer Institute · USUniversity of Iowa · US

Funding

Virology and Smallpox VaccinationsU54AI057160 · NIAID · WASHINGTON UNIVERSITY · PI RAY, RANJIT · 2003 to 2013
$80.9M
Retrovirus Budding and Endosomal SortingZIABC010776 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI FREED, ERIC · 2009 to 2015
$3.5M
IFITM-mediated Inhibition of HIV Infection and Viral CountermeasuresR01AI112381 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI LIU, SHAN-LU · 2014 to 2018
$1.7M
Molecular Regulation of MS Susceptibility GenesR01AI107759 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI WEAVER, CASEY T · 2013 to 2016
$1.4M
Elucidation of HIV Env acquisition strategiesR01GM110776 · NIGMS · UNIVERSITY OF MISSOURI-COLUMBIA · PI JOHNSON, MARC C · 2013 to 2016
$1.2M
Novel Cellular Factors Restricting Viral Membrane FusionR21AI105584 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI LIU, SHAN-LU · 2013 to 2014
$421k
Inhibition of Ebolavirus Entry by IFITM2 ProteinR21AI109464 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI LIU, SHAN-LU · 2014 to 2015
$400k
Restriction of Viral Membrane Fusion and Entry by IFITM ProteinsR56AI107095 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI LIU, SHAN-LU · 2014 to 2014
$393k
Intramural NIH HHSNIAID NIH HHS R01 AI1077519NIAID NIH HHS R01 AI107759NIAID NIH HHS R01 AI112381NIAID NIH HHS R01AI112381NIAID NIH HHS R21 AI105584NIAID NIH HHS R21 AI109464NIAID NIH HHS R56 AI107095NIAID NIH HHS U54 AI057160NIGMS NIH HHS R01 GM110776
6 · The paper itself

Abstract

Accumulating evidence indicates that T-cell immunoglobulin (Ig) and mucin domain (TIM) proteins play critical roles in viral infections. Herein, we report that the TIM-family proteins strongly inhibit HIV-1 release, resulting in diminished viral production and replication. Expression of TIM-1 causes HIV-1 Gag and mature viral particles to accumulate on the plasma membrane. Mutation of the phosphatidylserine (PS) binding sites of TIM-1 abolishes its ability to block HIV-1 release. TIM-1, but to a much lesser extent PS-binding deficient mutants, induces PS flipping onto the cell surface; TIM-1 is also found to be incorporated into HIV-1 virions. Importantly, TIM-1 inhibits HIV-1 replication in CD4-positive Jurkat cells, despite its capability of up-regulating CD4 and promoting HIV-1 entry. In addition to TIM-1, TIM-3 and TIM-4 also block the release of HIV-1, as well as that of murine leukemia virus (MLV) and Ebola virus (EBOV); knockdown of TIM-3 in differentiated monocyte-derived macrophages (MDMs) enhances HIV-1 production. The inhibitory effects of TIM-family proteins on virus release are extended to other PS receptors, such as Axl and RAGE. Overall, our study uncovers a novel ability of TIM-family proteins to block the release of HIV-1 and other viruses by interaction with virion- and cell-associated PS. Our work provides new insights into a virus-cell interaction that is mediated by TIMs and PS receptors.

Indexed as

CD4-Positive T-LymphocytesCell MembraneGene Knockdown TechniquesHEK293 CellsHeLa CellsHepatitis A Virus Cellular Receptor 1Hepatitis A Virus Cellular Receptor 2HIV-1HIV InfectionsHumansJurkat CellsMembrane GlycoproteinsMembrane ProteinsPhosphatidylserinesReceptors, VirusRNA, Small InterferingHAVCR1 protein, humanHAVCR2 protein, humanHepatitis A Virus Cellular Receptor 1Hepatitis A Virus Cellular Receptor 2Membrane GlycoproteinsMembrane ProteinsPhosphatidylserinesReceptors, VirusRNA, Small InterferingTIMD4 protein, human

Identifiers

PMID25136083
PMCPMC4156686
OpenAlexW2071776498

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.