Evidence map›Paper›PMID 25133494›Full record

ArticlePloS one2014

Fine-tuning of Smad protein function by poly(ADP-ribose) polymerases and poly(ADP-ribose) glycohydrolase during transforming growth factor β signaling.

Markus Dahl, Varun Maturi, Peter Lönn, Panagiotis Papoutsoglou, Agata Zieba, Michael Vanlandewijck, Lars P van der Heide, Yukihide Watanabe, Ola Söderberg, Michael O Hottiger and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Markus DahlLudwig Institute for Cancer Research, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Varun MaturiLudwig Institute for Cancer Research, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Peter LönnLudwig Institute for Cancer Research, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Panagiotis PapoutsoglouLudwig Institute for Cancer Research, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Agata ZiebaDepartment of Immunology, Genetics and Pathology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Michael VanlandewijckLudwig Institute for Cancer Research, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Lars P van der HeideLudwig Institute for Cancer Research, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Yukihide WatanabeLudwig Institute for Cancer Research, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Ola SöderbergDepartment of Immunology, Genetics and Pathology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Michael O HottigerInstitute of Veterinary Biochemistry and Molecular Biology, University of Zurich, Zurich, Switzerland.
Carl-Henrik HeldinLudwig Institute for Cancer Research, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Aristidis MoustakasLudwig Institute for Cancer Research, Science for Life Laboratory, Uppsala University, Uppsala, Sweden; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Ludwig Cancer Research · SEScience for Life Laboratory · SEUppsala University · SEUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInitiation, amplitude, duration and termination of transforming growth factor β (TGFβ) signaling via Smad proteins is regulated by post-translational modifications, including phosphorylation, ubiquitination and acetylation. We previously reported that ADP-ribosylation of Smads by poly(ADP-ribose) polymerase 1 (PARP-1) negatively influences Smad-mediated transcription. PARP-1 is known to functionally interact with PARP-2 in the nucleus and the enzyme poly(ADP-ribose) glycohydrolase (PARG) can remove poly(ADP-ribose) chains from target proteins. Here we aimed at analyzing possible cooperation between PARP-1, PARP-2 and PARG in regulation of TGFβ signaling.

methodsA robust cell model of TGFβ signaling, i.e. human HaCaT keratinocytes, was used. Endogenous Smad3 ADP-ribosylation and protein complexes between Smads and PARPs were studied using proximity ligation assays and co-immunoprecipitation assays, which were complemented by in vitro ADP-ribosylation assays using recombinant proteins. Real-time RT-PCR analysis of mRNA levels and promoter-reporter assays provided quantitative analysis of gene expression in response to TGFβ stimulation and after genetic perturbations of PARP-1/-2 and PARG based on RNA interference.

resultsTGFβ signaling rapidly induces nuclear ADP-ribosylation of Smad3 that coincides with a relative enhancement of nuclear complexes of Smads with PARP-1 and PARP-2. Inversely, PARG interacts with Smads and can de-ADP-ribosylate Smad3 in vitro. PARP-1 and PARP-2 also form complexes with each other, and Smads interact and activate auto-ADP-ribosylation of both PARP-1 and PARP-2. PARP-2, similar to PARP-1, negatively regulates specific TGFβ target genes (fibronectin, Smad7) and Smad transcriptional responses, and PARG positively regulates these genes. Accordingly, inhibition of TGFβ-mediated transcription caused by silencing endogenous PARG expression could be relieved after simultaneous depletion of PARP-1.

conclusionNuclear Smad function is negatively regulated by PARP-1 that is assisted by PARP-2 and positively regulated by PARG during the course of TGFβ signaling.

Indexed as

FibronectinsGene Expression RegulationGlycoside HydrolasesHEK293 CellsHumansPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) PolymerasesProtein Processing, Post-TranslationalSignal TransductionSmad2 ProteinSmad3 ProteinSmad7 ProteinTranscription, GeneticTransforming Growth Factor betaFibronectinsGlycoside HydrolasesPARP1 protein, humanPARP2 protein, humanpoly ADP-ribose glycohydrolasePoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) PolymerasesSmad2 ProteinSMAD2 protein, humanSmad3 ProteinSMAD3 protein, humanSmad7 ProteinSMAD7 protein, humanTransforming Growth Factor beta

Identifiers

PMID25133494
PMCPMC4136792
OpenAlexW2072709416

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.