Evidence map›Paper›PMID 25131811›Full record

ReviewProtein science : a publication of the Protein Society2014

Grip it and rip it: structural mechanisms of DNA helicase substrate binding and unwinding.

Basudeb Bhattacharyya, James L Keck

Open access · bronzeAbstract readReview
In one paragraph

Review in Protein science : a publication of the Protein Society, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 31 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Structural Chemistry of Helicase Inhibition.Journal of medicinal chemistry · 2025
    Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. How Does a Helicase Unwind DNA? Insights from RecBCD Helicase.BioEssays : news and reviews in molecular, cellular and developmental biology · 2018
    Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Structural mechanisms of DNA binding and unwinding in bacterial RecQ helicases.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Basudeb BhattacharyyaDepartment of Biomolecular Chemistry, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin, 53706; Department of Chemistry and Biochemistry, University of Wisconsin-La Crosse, La Crosse, Wisconsin, 53601.
James L Keck
University of Wisconsin–La Crosse · USUniversity of Wisconsin–Madison · US

Funding

GRADUATE TRAINING IN MOLECULAR BIOSCIENCEST32GM007215 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HULL, CHRISTINA M · 1985 to 2018
$22.5M
Structure and Function of the Bacterial PrimosomeR01GM098885 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI James L Keck · 2012 to 2026
$4.0M
Antibiotic targeting of protein interfaces in bacterial genome maintenance compleR33AI111676 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KECK, JAMES L · 2016 to 2018
$1.3M
Antibiotic targeting of protein interfaces in bacterial genome maintenance compleR21AI111676 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI ANDES, DAVID R, KECK, JAMES L · 2014 to 2015
$406k
Targeting the Fanconi Anemia/Bloom Dissolvasome protein interface as a discoveryR21CA178475 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI KECK, JAMES L · 2013 to 2014
$352k
NCI NIH HHS CA178475NIAID NIH HHS AI111676NIGMS NIH HHS GM07215NIGMS NIH HHS GM098885NIGMS NIH HHS T32 GM007215
6 · The paper itself

Abstract

Maintenance and faithful transmission of genomic information depends on the efficient execution of numerous DNA replication, recombination, and repair pathways. Many of the enzymes that catalyze steps within these pathways require access to sequence information that is buried in the interior of the DNA double helix, which makes DNA unwinding an essential cellular reaction. The unwinding process is mediated by specialized molecular motors called DNA helicases that couple the chemical energy derived from nucleoside triphosphate hydrolysis to the otherwise non-spontaneous unwinding reaction. An impressive number of high-resolution helicase structures are now available that, together with equally important mechanistic studies, have begun to define the features that allow this class of enzymes to function as molecular motors. In this review, we explore the structural features within DNA helicases that are used to bind and unwind DNA. We focus in particular on "aromatic-rich loops" that allow some helicases to couple single-stranded DNA binding to ATP hydrolysis and "wedge/pin" elements that provide mechanical tools for DNA strand separation when connected to translocating motor domains.

Indexed as

DNADNA HelicasesBacteriaHumansModels, MolecularNucleic Acid ConformationVirusesDNADNA Helicasesaromatic-rich loopshelicasemolecular motornucleic acidpinswedges

Identifiers

PMID25131811
PMCPMC4241101
OpenAlexW1537750733

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.