Evidence map›Paper›PMID 25129147›Full record

ArticleNature genetics2014

A genetic mechanism for Tibetan high-altitude adaptation.

Felipe R Lorenzo, Chad Huff, Mikko Myllymäki, Benjamin Olenchock, Sabina Swierczek, Tsewang Tashi, Victor Gordeuk, Tana Wuren, Ge Ri-Li, Donald A McClain and 13 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 244 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
244citing papers in PubMed, 2 pooled it
26.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

244 citing papers in PubMed, 2 syntheses or guidelines pooled it, 430 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
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  11. Article
  12. Review
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  14. Observational
  15. Review
  16. Altitude hypoxia and hypoxemia: pathogenesis and management.Signal transduction and targeted therapy · 2026
    Review
  17. Article
  18. Article
  19. Article
  20. High-altitude polycythemia: State-of-the-art review.Therapeutic advances in hematology · 2026
    Review

184 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 13 institutions in 4 countries.

Felipe R Lorenzo1] Department of Medicine, University of Utah School of Medicine and George E. Wahlin Veterans Administration Medical Center, Salt Lake City, Utah, USA. [2].
Chad Huff1] Eccles Institute of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, USA. [2] Department of Epidemiology, University of Texas M.D. Anderson Cancer Center, Houston, Texas, USA. [3].
Mikko Myllymäki1] Biocenter Oulu, Faculty of Biochemistry and Molecular Medicine, Oulu Center for Cell-Matrix Research, University of Oulu, Oulu, Finland. [2].
Benjamin OlenchockDivision of Cardiovascular Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Sabina SwierczekDepartment of Medicine, University of Utah School of Medicine and George E. Wahlin Veterans Administration Medical Center, Salt Lake City, Utah, USA.
Tsewang TashiDepartment of Medicine, University of Utah School of Medicine and George E. Wahlin Veterans Administration Medical Center, Salt Lake City, Utah, USA.
Victor GordeukSickle Cell Center, University of Illinois, Chicago, Illinois, USA.
Tana WurenResearch Center for High-Altitude Medicine, Qinghai University, Xining, People's Republic of China.
Ge Ri-LiResearch Center for High-Altitude Medicine, Qinghai University, Xining, People's Republic of China.
Donald A McClainDepartment of Medicine, University of Utah School of Medicine and George E. Wahlin Veterans Administration Medical Center, Salt Lake City, Utah, USA.
Tahsin M KhanIcahn School of Medicine at Mount Sinai, New York, New York, USA.
Parvaiz A KoulSher-i-Kashmir Institute of Medical Sciences, Srinagar, India.
Prasenjit GuchhaitRegional Centre for Biotechnology, Gurgaon, India.
Mohamed E Salama1] Department of Pathology, University of Utah, Salt Lake City, Utah, USA. [2] ARUP Laboratories, Hematopathology, Salt Lake City, Utah, USA.
Jinchuan Xing1] Eccles Institute of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, USA. [2] Department of Genetics, Rutgers, State University of New Jersey, Piscataway, New Jersey, USA.
Gregg L SemenzaVascular Program, Institute for Cell Engineering, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Ella Liberzon1] Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts, USA. [2] Howard Hughes Medical Institute, Chevy Chase, Maryland, USA.
Andrew WilsonDepartmant of Family and Preventive Medicine, University of Utah School of Medicine, Salt Lake City, Utah, USA.
Tatum S Simonson1] Eccles Institute of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, USA. [2] Division of Physiology, University of California San Diego School of Medicine, La Jolla, California, USA.
Lynn B JordeEccles Institute of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, USA.
William G Kaelin1] Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts, USA. [2] Howard Hughes Medical Institute, Chevy Chase, Maryland, USA.
Peppi Koivunen1] Biocenter Oulu, Faculty of Biochemistry and Molecular Medicine, Oulu Center for Cell-Matrix Research, University of Oulu, Oulu, Finland. [2].
Josef T Prchal1] Department of Medicine, University of Utah School of Medicine and George E. Wahlin Veterans Administration Medical Center, Salt Lake City, Utah, USA. [2] Eccles Institute of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, USA. [3].
University of Utah · USHarvard University · USQinghai University · CNUniversity of Oulu · FIBrigham and Women's Hospital · USGeorge E. Wahlen Department of VA Medical Center · USIcahn School of Medicine at Mount Sinai · USJohns Hopkins Medicine · USRegional Centre for Biotechnology · INRutgers, The State University of New Jersey · USSher-i-Kashmir Institute of Medical Sciences · INUniversity of California, San Diego · USUniversity of Illinois Urbana-Champaign · US

Funding

Tissue BankP01CA108671 · NCI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI Ronald Hoffman · 2006 to 2026
$82.0M
University of Utah Center for Clinical and Translational ScienceUL1TR001067 · NCATS · UNIVERSITY OF UTAH · PI DERE, WILLARD H., HESS, RACHEL · 2013 to 2017
$19.8M
Training in Respiratory Biology: Innovate, Integrate, and TranslateT32HL098062 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI POWELL, FRANK L. · 2010 to 2014
$2.1M
Regulation of cellular metabolism by EglN dioxygenasesK08HL119355 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI OLENCHOCK, BENJAMIN A · 2013 to 2017
$746k
Integrating Physiology and Genomics to Reveal Functional Adaptation in High-Altitude TibetansR00HL118215 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SIMONSON, TATUM S · 2015 to 2017
$744k
High-throughput Mobile Element Genotyping Using Next-generation SequencingR00HG005846 · NHGRI · RUTGERS, THE STATE UNIV OF N.J. · PI XING, JINCHUAN · 2012 to 2014
$736k
High-throughput Mobile Element Genotyping Using Next-generation SequencingK99HG005846 · NHGRI · UNIVERSITY OF UTAH · PI XING, JINCHUAN · 2010 to 2011
$179k
Iron, the circadian clock, and diabetes riskI01BX001140 · VA · W G HEFNER VA MEDICAL CENTER · PI MCCLAIN, DONALD A. · 2011 to 2018
–
BLRD VA I01 BX001140NCATS NIH HHS UL1 TR001067NCI NIH HHS P01 CA108671NCI NIH HHS P01CA108671NHGRI NIH HHS HG005846NHGRI NIH HHS K99 HG005846NHGRI NIH HHS R00 HG005846NHLBI NIH HHS HL098062NHLBI NIH HHS HL119355-01NHLBI NIH HHS K08 HL119355NHLBI NIH HHS R00 HL118215NHLBI NIH HHS T32 HL098062
6 · The paper itself

Abstract

Tibetans do not exhibit increased hemoglobin concentration at high altitude. We describe a high-frequency missense mutation in the EGLN1 gene, which encodes prolyl hydroxylase 2 (PHD2), that contributes to this adaptive response. We show that a variant in EGLN1, c.[12C>G; 380G>C], contributes functionally to the Tibetan high-altitude phenotype. PHD2 triggers the degradation of hypoxia-inducible factors (HIFs), which mediate many physiological responses to hypoxia, including erythropoiesis. The PHD2 p.[Asp4Glu; Cys127Ser] variant exhibits a lower K(m) value for oxygen, suggesting that it promotes increased HIF degradation under hypoxic conditions. Whereas hypoxia stimulates the proliferation of wild-type erythroid progenitors, the proliferation of progenitors with the c.[12C>G; 380G>C] mutation in EGLN1 is significantly impaired under hypoxic culture conditions. We show that the c.[12C>G; 380G>C] mutation originated ∼8,000 years ago on the same haplotype previously associated with adaptation to high altitude. The c.[12C>G; 380G>C] mutation abrogates hypoxia-induced and HIF-mediated augmentation of erythropoiesis, which provides a molecular mechanism for the observed protection of Tibetans from polycythemia at high altitude.

Indexed as

AcclimatizationAdaptation, PhysiologicalAdultAltitudeAsian PeopleErythropoiesisFemaleHumansHypoxiaHypoxia-Inducible Factor-Proline DioxygenasesMaleMiddle AgedPhenotypePolycythemiaPolymorphism, Single NucleotideYoung AdultEGLN1 protein, humanHypoxia-Inducible Factor-Proline Dioxygenases

Identifiers

PMID25129147
PMCPMC4473257
OpenAlexW2100482242

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.