Evidence map›Paper›PMID 25129144›Full record

ArticleNature genetics2014

JAGN1 deficiency causes aberrant myeloid cell homeostasis and congenital neutropenia.

Kaan Boztug, Päivi M Järvinen, Elisabeth Salzer, Tomas Racek, Sebastian Mönch, Wojciech Garncarz, E Michael Gertz, Alejandro A Schäffer, Aristotelis Antonopoulos, Stuart M Haslam and 25 more

Abstract read
In one paragraph

Article in Nature genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
8.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 141 citations in OpenAlex.

  1. Article
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  4. Flavopiridol restores granulopoiesis in experimental models of severe congenital neutropenia.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 13 institutions in 7 countries.

Kaan Boztug1] CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria. [2] Department of Pediatrics and Adolescent Medicine, Medical University of Vienna, Vienna, Austria.
Päivi M JärvinenDepartment of Pediatrics, Dr. von Hauner Children's Hospital, Ludwig Maximilians University, Munich, Germany.
Elisabeth SalzerCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Tomas RacekDepartment of Pediatrics, Dr. von Hauner Children's Hospital, Ludwig Maximilians University, Munich, Germany.
Sebastian MönchDepartment of Pediatrics, Dr. von Hauner Children's Hospital, Ludwig Maximilians University, Munich, Germany.
Wojciech GarncarzCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
E Michael GertzComputational Biology Branch, National Center for Biotechnology Information, US National Institutes of Health, Bethesda, Maryland, USA.
Alejandro A SchäfferComputational Biology Branch, National Center for Biotechnology Information, US National Institutes of Health, Bethesda, Maryland, USA.
Aristotelis AntonopoulosDepartment of Life Sciences, Imperial College London, London, UK.
Stuart M HaslamDepartment of Life Sciences, Imperial College London, London, UK.
Lena SchieckDepartment of Pediatric Hematology/Oncology, Hannover Medical School, Hannover, Germany.
Jacek PuchałkaDepartment of Pediatrics, Dr. von Hauner Children's Hospital, Ludwig Maximilians University, Munich, Germany.
Jana Diestelhorst1] Department of Pediatrics, Dr. von Hauner Children's Hospital, Ludwig Maximilians University, Munich, Germany. [2] Department of Pediatric Hematology/Oncology, Hannover Medical School, Hannover, Germany.
Giridharan AppaswamyDepartment of Pediatric Hematology/Oncology, Hannover Medical School, Hannover, Germany.
Brigitte LescoeurDepartment of Hematology, Hospital R Debré, Paris, France.
Roberto GiambrunoCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Johannes W BigenzahnCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Ulrich EllingInstitute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna, Austria.
Dietmar PfeiferDepartment of Hematology, Oncology and Stem Cell Transplantation, University Medical Center Freiburg, Freiburg, Germany.
Cecilia Domínguez CondeCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Michael H AlbertDepartment of Pediatrics, Dr. von Hauner Children's Hospital, Ludwig Maximilians University, Munich, Germany.
Karl WelteDepartment of Pediatric Hematology/Oncology, Hannover Medical School, Hannover, Germany.
Gudrun BrandesDepartment of Cell Biology, Hannover Medical School, Hannover, Germany.
Roya SherkatAcquired Immunodeficiency Research Center, Isfahan University of Medical Sciences, Isfahan, Iran.
Jutte van der Werff Ten BoschDepartment of Pediatrics, Hospital of the Free University of Brussels, Brussels, Belgium.
Nima RezaeiResearch Center for Immunodeficiencies, Pediatrics Center of Excellence, Children's Medical Center, Tehran University of Medical Sciences, Tehran, Iran.
Amos EtzioniDivision of Pediatrics and Immunology, Rappaport School of Medicine, Technion, Haifa, Israel.
Christine Bellanné-ChantelotGenetics Department, AP-HP Pitié-Salpêtrière Hospital, Pierre and Marie Curie University, Paris, France.
Giulio Superti-FurgaCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.ORCID 0000000205701768
Josef M PenningerInstitute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna, Austria.
Keiryn L BennettCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Julia von BlumeMax Planck Institute of Biochemistry, Martinsried, Germany.
Anne DellDepartment of Life Sciences, Imperial College London, London, UK.
Jean DonadieuNeutropenia Registry, Reference Center for Hereditary Immunodeficiencies, Pediatric Hematology, AP-HP, Armand Trousseau Children's Hospital, Paris, France.
Christoph KleinDepartment of Pediatrics, Dr. von Hauner Children's Hospital, Ludwig Maximilians University, Munich, Germany.
Austrian Academy of Sciences · ATLudwig-Maximilians-Universität München · DEMedizinische Hochschule Hannover · DEImperial College London · GBInstitute of Molecular Biotechnology · ATNational Institutes of Health · USSorbonne Université · FRChildren's Medical Center · IRHôpital Robert-Debré · FRIsfahan University of Medical Sciences · IRMax Planck Institute of Biochemistry · DETechnion – Israel Institute of Technology · ILUniversity Medical Center Freiburg · DE

Funding

Case Studies In GeneticsZIALM000097 · NLM · NATIONAL LIBRARY OF MEDICINE · PI SCHAFFER, ALEJANDRO A · 2009 to 2019
$4.6M
Case Studies In GeneticsZ01LM000097 · NLM · NATIONAL LIBRARY OF MEDICINE · PI SCHAFFER, ALEJANDRO A · 2002 to 2008
$452k
Austrian Science Fund FWF Y 595Biotechnology and Biological Sciences Research Council BB/F0083091Biotechnology and Biological Sciences Research Council BB/K016164/1European Research Council 310857Intramural NIH HHS Z01 LM000097
6 · The paper itself

Abstract

The analysis of individuals with severe congenital neutropenia (SCN) may shed light on the delicate balance of factors controlling the differentiation, maintenance and decay of neutrophils. We identify 9 distinct homozygous mutations in the JAGN1 gene encoding Jagunal homolog 1 in 14 individuals with SCN. JAGN1-mutant granulocytes are characterized by ultrastructural defects, a paucity of granules, aberrant N-glycosylation of multiple proteins and increased incidence of apoptosis. JAGN1 participates in the secretory pathway and is required for granulocyte colony-stimulating factor receptor-mediated signaling. JAGN1 emerges as a factor that is necessary in the differentiation and survival of neutrophils.

Indexed as

AdolescentAdultApoptosisCell DifferentiationCell SurvivalChildChild, PreschoolCongenital Bone Marrow Failure SyndromesFemaleGlycosylationHomeostasisHumansInfantInfant, NewbornMaleMembrane ProteinsJAGN1 protein, humanMembrane ProteinsReceptors, Granulocyte Colony-Stimulating Factor

Identifiers

PMID25129144
PMCPMC4829076
OpenAlexW2000076988

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.