Evidence map›Paper›PMID 25126731›Full record

ArticleAutophagy2014

Correlative light and electron microscopy imaging of autophagy in a zebrafish infection model.

Rohola Hosseini, Gerda Em Lamers, Zlatan Hodzic, Annemarie H Meijer, Marcel Jm Schaaf, Herman P Spaink

Open access · hybridAbstract read
In one paragraph

Article in Autophagy, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 57 citations in OpenAlex.

  1. PIKfyve mediates the maturation of mycobacteria-containing vesicles.Frontiers in cellular and infection microbiology · 2026
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  16. A Human Osteocyte Cell Line Model for StudyingFrontiers in cellular and infection microbiology · 2021
    Article
  17. Journal of cell science · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Rohola HosseiniInstitute of Biology; Leiden University; Leiden, The Netherlands.
Gerda Em LamersInstitute of Biology; Leiden University; Leiden, The Netherlands.
Zlatan HodzicInstitute of Biology; Leiden University; Leiden, The Netherlands.
Annemarie H MeijerInstitute of Biology; Leiden University; Leiden, The Netherlands.
Marcel Jm SchaafInstitute of Biology; Leiden University; Leiden, The Netherlands.
Herman P SpainkInstitute of Biology; Leiden University; Leiden, The Netherlands.
Leiden University · NLUniversity of Applied Sciences Leiden · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High-resolution imaging of autophagy has been used intensively in cell culture studies, but so far it has been difficult to visualize this process in detail in whole animal models. In this study we present a versatile method for high-resolution imaging of microbial infection in zebrafish larvae by injecting pathogens into the tail fin. This allows visualization of autophagic compartments by light and electron microscopy, which makes it possible to correlate images acquired by the 2 techniques. Using this method we have studied the autophagy response against Mycobacterium marinum infection. We show that mycobacteria during the progress of infection are frequently associated with GFP-Lc3-positive vesicles, and that 2 types of GFP-Lc3-positive vesicles were observed. The majority of these vesicles were approximately 1 μm in size and in close vicinity of bacteria, and a smaller number of GFP-Lc3-positive vesicles was larger in size and were observed to contain bacteria. Quantitative data showed that these larger vesicles occurred significantly more in leukocytes than in other cell types, and that approximately 70% of these vesicles were positive for a lysosomal marker. Using electron microscopy, it was found that approximately 5% of intracellular bacteria were present in autophagic vacuoles and that the remaining intracellular bacteria were present in phagosomes, lysosomes, free inside the cytoplasm or occurred as large aggregates. Based on correlation of light and electron microscopy images, it was shown that GFP-Lc3-positive vesicles displayed autophagic morphology. This study provides a new approach for injection of pathogens into the tail fin, which allows combined light and electron microscopy imaging in vivo and opens new research directions for studying autophagy process related to infectious diseases.

Indexed as

AutophagyAnimal FinsAnimalsDisease Models, AnimalGreen Fluorescent ProteinsLarvaMicroscopy, ConfocalMicroscopy, ElectronMicrotubule-Associated ProteinsMycobacterium Infections, NontuberculousMycobacterium marinumZebrafishZebrafish ProteinsGreen Fluorescent Proteinsmap1lc3b protein, zebrafishMicrotubule-Associated ProteinsZebrafish Proteinsautophagic vacuoleconfocal laser scanning microscopycorrelativeimaginginfectionmycobacteriumtail finTEMzebrafish

Identifiers

PMID25126731
PMCPMC4198367
OpenAlexW2037241699

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.