Evidence map›Paper›PMID 25124392›Full record

ArticleParasitology2015

UDP-galactose 4'-epimerase from the liver fluke, Fasciola hepatica: biochemical characterization of the enzyme and identification of inhibitors.

Veronika L Zinsser, Steffen Lindert, Samantha Banford, Elizabeth M Hoey, Alan Trudgett, David J Timson

Abstract read
In one paragraph

Article in Parasitology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. AnHeliyon · 2024
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Veronika L ZinsserSchool of Biological Sciences, Queen's University Belfast, Medical Biology Centre,97 Lisburn Road, Belfast BT9 7BL,UK.
Steffen LindertDepartment of Pharmacology,Center for Theoretical Biological Physics, University of California San Diego,La Jolla, CA 92093,USA.
Samantha BanfordSchool of Biological Sciences, Queen's University Belfast, Medical Biology Centre,97 Lisburn Road, Belfast BT9 7BL,UK.
Elizabeth M HoeySchool of Biological Sciences, Queen's University Belfast, Medical Biology Centre,97 Lisburn Road, Belfast BT9 7BL,UK.
Alan TrudgettSchool of Biological Sciences, Queen's University Belfast, Medical Biology Centre,97 Lisburn Road, Belfast BT9 7BL,UK.
David J TimsonSchool of Biological Sciences, Queen's University Belfast, Medical Biology Centre,97 Lisburn Road, Belfast BT9 7BL,UK.
Queen's University Belfast · GBUniversity of California San Diego · US

Funding

THEORY OF BIOMOLECULAR DIFFUSIONR01GM031749 · NIGMS · UNIVERSITY OF HOUSTON · PI HUBER, GARY ALEXANDER, MCCAMMON, JAMES ANDREW · 1985 to 2022
$7.8M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM031749
6 · The paper itself

Abstract

Leloir pathway enzyme uridine diphosphate (UDP)-galactose 4'-epimerase from the common liver fluke Fasciola hepatica (FhGALE) was identified and characterized. The enzyme can be expressed in, and purified from, Escherichia coli. The recombinant enzyme is active: the K(m) (470 μM) is higher than the corresponding human enzyme (HsGALE), whereas the k(cat) (2.3 s(-1)) is substantially lower. FhGALE binds NAD(+) and has shown to be dimeric by analytical gel filtration. Like the human and yeast GALEs, FhGALE is stabilized by the substrate UDP-galactose. Molecular modelling predicted that FhGALE adopts a similar overall fold to HsGALE and that tyrosine 155 is likely to be the catalytically critical residue in the active site. In silico screening of the National Cancer Institute Developmental Therapeutics Program library identified 40 potential inhibitors of FhGALE which were tested in vitro. Of these, 6 showed concentration-dependent inhibition of FhGALE, some with nanomolar IC50 values. Two inhibitors (5-fluoroorotate and N-[(benzyloxy)carbonyl]leucyltryptophan) demonstrated selectivity for FhGALE over HsGALE. These compounds also thermally destabilized FhGALE in a concentration-dependent manner. Interestingly, the selectivity of 5-fluoroorotate was not shown by orotic acid, which differs in structure by 1 fluorine atom. These results demonstrate that, despite the structural and biochemical similarities of FhGALE and HsGALE, it is possible to discover compounds which preferentially inhibit FhGALE.

Indexed as

Amino Acid SequenceAnimalsEnzyme InhibitorsFasciola hepaticaInhibitory Concentration 50Isoelectric PointMolecular Sequence DataProtein MultimerizationUDPglucose 4-EpimeraseEnzyme InhibitorsUDPglucose 4-EpimeraseN-[(benzyloxy)carbonyl]leucyltryptophan

Identifiers

PMID25124392
PMCPMC4515351
OpenAlexW2151266317

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.