Evidence map›Paper›PMID 25122755›Full record

ArticleThe Journal of biological chemistry2014

Kinesin-2 KIF3AB exhibits novel ATPase characteristics.

Clayton D Albracht, Katherine C Rank, Steven Obrzut, Ivan Rayment, Susan P Gilbert

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Kinesin-2 motors: Kinetics and biophysics.The Journal of biological chemistry · 2018
    Review
  8. Article
  9. Common general anesthetic propofol impairs kinesin processivity.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Clayton D AlbrachtFrom the Department of Biological Sciences and the Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, New York 12180 and.
Katherine C Rankthe Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706.
Steven ObrzutFrom the Department of Biological Sciences and the Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, New York 12180 and.
Ivan Raymentthe Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706 ivan_rayment@biochem.wisc.edu.
Susan P GilbertFrom the Department of Biological Sciences and the Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, New York 12180 and sgilbert@rpi.edu.
Rensselaer Polytechnic Institute · USUniversity of Wisconsin–Madison · US

Funding

GRADUATE TRAINING IN MOLECULAR BIOSCIENCEST32GM007215 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HULL, CHRISTINA M · 1985 to 2018
$22.5M
Mechanistic Analysis of Microtubule Based MotorsR37GM054141 · NIGMS · RENSSELAER POLYTECHNIC INSTITUTE · PI GILBERT, SUSAN P. · 2013 to 2022
$4.4M
Structural Studies of Myosin Motor ProteinsR01GM086351 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI RAYMENT, IVAN · 2009 to 2010
$586k
NIGMS NIH HHS R01 GM086351NIGMS NIH HHS R01-GM086351NIGMS NIH HHS R37 GM054141NIGMS NIH HHS R37-GM54141NIGMS NIH HHS T32 GM007215NIGMS NIH HHS T32-GM07215
6 · The paper itself

Abstract

KIF3AB is an N-terminal processive kinesin-2 family member best known for its role in intraflagellar transport. There has been significant interest in KIF3AB in defining the key principles that underlie the processivity of KIF3AB in comparison with homodimeric processive kinesins. To define the ATPase mechanism and coordination of KIF3A and KIF3B stepping, a presteady-state kinetic analysis was pursued. For these studies, a truncated murine KIF3AB was generated. The results presented show that microtubule association was fast at 5.7 μm(-1) s(-1), followed by rate-limiting ADP release at 12.8 s(-1). ATP binding at 7.5 μm(-1) s(-1) was followed by an ATP-promoted isomerization at 84 s(-1) to form the intermediate poised for ATP hydrolysis, which then occurred at 33 s(-1). ATP hydrolysis was required for dissociation of the microtubule·KIF3AB complex, which was observed at 22 s(-1). The dissociation step showed an apparent affinity for ATP that was very weak (K½,ATP at 133 μm). Moreover, the linear fit of the initial ATP concentration dependence of the dissociation kinetics revealed an apparent second-order rate constant at 0.09 μm(-1) s(-1), which is inconsistent with fast ATP binding at 7.5 μm(-1) s(-1) and a Kd ,ATP at 6.1 μm. These results suggest that ATP binding per se cannot account for the apparent weak K½,ATP at 133 μm. The steady-state ATPase Km ,ATP, as well as the dissociation kinetics, reveal an unusual property of KIF3AB that is not yet well understood and also suggests that the mechanochemistry of KIF3AB is tuned somewhat differently from homodimeric processive kinesins.

Indexed as

Adenosine DiphosphateAdenosine TriphosphatasesAdenosine TriphosphateAnimalsDimerizationKinesinsKineticsMiceMicrotubulesAdenosine DiphosphateAdenosine TriphosphatasesAdenosine TriphosphateKif3a protein, mouseKif3b protein, mouseKinesinsATPaseIntracellular TraffickingIntraflagellar TransportKinesinMicrotubulePresteady-state KineticsProcessivity

Identifiers

PMID25122755
PMCPMC4183818
OpenAlexW2029448351

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.