Evidence map›Paper›PMID 25122507›Full record

ArticlePloS one2014

Domain organization, catalysis and regulation of eukaryotic cystathionine beta-synthases.

Tomas Majtan, Angel L Pey, Roberto Fernández, José A Fernández, Luis A Martínez-Cruz, Jan P Kraus

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
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  7. The coralScience advances · 2022
    Article
  8. Article
  9. Article
  10. HCellular and molecular life sciences : CMLS · 2022
    Article
  11. Article
  12. Article
  13. Structural insight into the unique conformation of cystathionine β-synthase fromComputational and structural biotechnology journal · 2021
    Article
  14. Article
  15. Article
  16. Review
  17. Hydrogen sulfide signaling in mitochondria and disease.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Review
  18. Regulators of the transsulfuration pathway.British journal of pharmacology · 2019
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Tomas MajtanDepartment of Pediatrics, University of Colorado, School of Medicine, Aurora, Colorado, United States of America.
Angel L PeyDepartment of Physical Chemistry, Faculty of Sciences, University of Granada, Granada, Spain.
Roberto FernándezDepartment of Physical Chemistry, Faculty of Science and Technology, University of the Basque Country (UPV/EHU), Leioa, Spain.
José A FernándezDepartment of Physical Chemistry, Faculty of Science and Technology, University of the Basque Country (UPV/EHU), Leioa, Spain.
Luis A Martínez-CruzStructural Biology Unit, CIC bioGUNE, Derio, Bizkaia, Spain.
Jan P KrausDepartment of Pediatrics, University of Colorado, School of Medicine, Aurora, Colorado, United States of America.
University of Colorado Denver · USUniversity of the Basque Country · ESCIC bioGUNE · ESUniversidad de Granada · ES

Funding

HOMOCYSTEINE, NITRIC OXIDE AND HEME: ROLE IN THROMBOSISR01HL065217 · NHLBI · UNIVERSITY OF WISCONSIN MADISON · PI BURSTYN, JUDITH N, KRAUS, JAN P. · 2000 to 2012
$3.1M
NHLBI NIH HHS HL065217NHLBI NIH HHS R01 HL065217
6 · The paper itself

Abstract

Cystathionine beta-synthase (CBS) is a key regulator of sulfur amino acid metabolism diverting homocysteine, a toxic intermediate of the methionine cycle, via the transsulfuration pathway to the biosynthesis of cysteine. Although the pathway itself is well conserved among eukaryotes, properties of eukaryotic CBS enzymes vary greatly. Here we present a side-by-side biochemical and biophysical comparison of human (hCBS), fruit fly (dCBS) and yeast (yCBS) enzymes. Preparation and characterization of the full-length and truncated enzymes, lacking the regulatory domains, suggested that eukaryotic CBS exists in one of at least two significantly different conformations impacting the enzyme's catalytic activity, oligomeric status and regulation. Truncation of hCBS and yCBS, but not dCBS, resulted in enzyme activation and formation of dimers compared to native tetramers. The dCBS and yCBS are not regulated by the allosteric activator of hCBS, S-adenosylmethionine (AdoMet); however, they have significantly higher specific activities in the canonical as well as alternative reactions compared to hCBS. Unlike yCBS, the heme-containing dCBS and hCBS showed increased thermal stability and retention of the enzyme's catalytic activity. The mass-spectrometry analysis and isothermal titration calorimetry showed clear presence and binding of AdoMet to yCBS and hCBS, but not dCBS. However, the role of AdoMet binding to yCBS remains unclear, unlike its role in hCBS. This study provides valuable information for understanding the complexity of the domain organization, catalytic specificity and regulation among eukaryotic CBS enzymes.

Indexed as

Protein Interaction Domains and MotifsAnimalsCatalysisCatalytic DomainCystathionine beta-SynthaseEnzyme ActivationGene ExpressionHumansModels, MolecularProtein ConformationProtein DenaturationProtein StabilityRecombinant ProteinsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationThermodynamicsCystathionine beta-SynthaseRecombinant Proteins

Identifiers

PMID25122507
PMCPMC4133348
OpenAlexW2067913805

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.