ArticlePloS one2014
Genome analysis of Bacillus amyloliquefaciens Subsp. plantarum UCMB5113: a rhizobacterium that improves plant growth and stress management.
Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.
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Who cites it
48 citing papers in PubMed.
- Genomic insights into Serratia bockelmanii strain 201: unlocking its potential for plant growth promotion and salt stress tolerance.BMC microbiology · 2026Article
- Isolation and pan-genome analysis of Acinetobacter junii SC22, a heavy metal(loid)s resistant and plant growth promoting bacterium, from the Zijin Gold and Copper mine.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2025Article
- Genomically-selected antifungal Bacillaceae strains improve wheat yield and baking quality.Applied microbiology and biotechnology · 2025Article
- Isolation ofMicroorganisms · 2025Article
- Desert-adapted plant growth-promoting pseudomonads modulate plant auxin homeostasis and mitigate salinity stress.Microbial biotechnology · 2024Article
- Comparative genomics reveals insights into the potential of Lysinibacillus irui as a plant growth promoter.Applied microbiology and biotechnology · 2024Article
- In Silico Safety Assessment ofInternational journal of molecular sciences · 2024Article
- Secretory molecules from secretion systems fine-tune the host-beneficial bacteria (PGPRs) interaction.Frontiers in microbiology · 2024Review
- Characterization ofMicroorganisms · 2023Article
- Secretome Analysis of the Plant Biostimulant Bacteria StrainsInternational journal of molecular sciences · 2022Article
- Biocontrol of citrus bacterial canker caused bySaudi journal of biological sciences · 2022Article
- Whole genome analysis for plant growth promotion profiling ofFrontiers in microbiology · 2022Article
- Designing a synthetic microbial community devoted to biological control: The case study of Fusarium wilt of banana.Frontiers in microbiology · 2022Article
- Antagonistic StrainPathogens (Basel, Switzerland) · 2021Article
- Review
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- A Review on the Biotechnological Applications of the Operational GroupMicroorganisms · 2021Review
- Nutritional quality improvement of soybean meal by Bacillus velezensis and Lactobacillus plantarum during two-stage solid- state fermentation.AMB Express · 2021Article
- Comparative Genome Analysis ofFrontiers in genetics · 2021Article
- Plant growth promoting rhizobacteria isolated from halophytes and drought-tolerant plants: genomic characterisation and exploration of phyto-beneficial traits.Scientific reports · 2020Article
Corrections and comments
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Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The Bacillus amyloliquefaciens subsp. plantarum strain UCMB5113 is a Gram-positive rhizobacterium that can colonize plant roots and stimulate plant growth and defense based on unknown mechanisms. This reinforcement of plants may provide protection to various forms of biotic and abiotic stress. To determine the genetic traits involved in the mechanism of plant-bacteria association, the genome sequence of UCMB5113 was obtained by assembling paired-end Illumina reads. The assembled chromosome of 3,889,532 bp was predicted to encode 3,656 proteins. Genes that potentially contribute to plant growth promotion such as indole-3-acetic acid (IAA) biosynthesis, acetoin synthesis and siderophore production were identified. Moreover, annotation identified putative genes responsible for non-ribosomal synthesis of secondary metabolites and genes supporting environment fitness of UCMB5113 including drug and metal resistance. A large number of genes encoding a diverse set of secretory proteins, enzymes of primary and secondary metabolism and carbohydrate active enzymes were found which reflect a high capacity to degrade various rhizosphere macromolecules. Additionally, many predicted membrane transporters provides the bacterium with efficient uptake capabilities of several nutrients. Although, UCMB5113 has the possibility to produce antibiotics and biosurfactants, the protective effect of plants to pathogens seems to be indirect and due to priming of plant induced systemic resistance. The availability of the genome enables identification of genes and their function underpinning beneficial interactions of UCMB5113 with plants.
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