Evidence map›Paper›PMID 25118290›Full record

ArticleThe Journal of biological chemistry2014

Antiparallel triple-strand architecture for prefibrillar Aβ42 oligomers.

Lei Gu, Cong Liu, James C Stroud, Sam Ngo, Lin Jiang, Zhefeng Guo

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Review
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  10. Review
  11. Segmental structural dynamics in Aβ42 globulomers.Biochemical and biophysical research communications · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Biophysical characteristics of lipid-induced Aβ oligomers correlate to distinctive phenotypes in transgenic mice.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
    Article
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Lei GuDepartment of Neurology, Brain Research Institute, Molecular Biology Institute, UCLA-DOE Institute for Genomics and Proteomics, University of California, Los Angeles, California 90095.
Cong LiuDepartments of Chemistry and Biochemistry and Biological Chemistry, Howard Hughes Medical Institute, UCLA-DOE Institute for Genomics and Proteomics, University of California, Los Angeles, California 90095,; Interdisciplinary Research Center on Biology and Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai, 200032, China, and.
James C StroudDepartment of Chemistry and Chemical Biology, Center for Biomedical Engineering, University of New Mexico, Albuquerque, New Mexico 87131.
Sam NgoDepartment of Neurology, Brain Research Institute, Molecular Biology Institute, UCLA-DOE Institute for Genomics and Proteomics, University of California, Los Angeles, California 90095.
Lin JiangDepartments of Chemistry and Biochemistry and Biological Chemistry, Howard Hughes Medical Institute, UCLA-DOE Institute for Genomics and Proteomics, University of California, Los Angeles, California 90095.
Zhefeng GuoDepartment of Neurology, Brain Research Institute, Molecular Biology Institute, UCLA-DOE Institute for Genomics and Proteomics, University of California, Los Angeles, California 90095. Electronic address: zhefeng@ucla.edu.

Funding

UCLA ALZHEIMERS DISEASE RESEARCH CENTERP50AG016570 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BREDESEN, DALE E. · 1999 to 2014
$25.9M
Structural biology of yeast prions.R01GM110448 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GUO, ZHEFENG · 2014 to 2018
$1.5M
Howard Hughes Medical InstituteNIA NIH HHS P50 AG016570NIA NIH HHS P50AG016570NIGMS NIH HHS R01 GM110448NIGMS NIH HHS R01GM110448
6 · The paper itself

Abstract

Aβ42 oligomers play key roles in the pathogenesis of Alzheimer disease, but their structures remain elusive partly due to their transient nature. Here, we show that Aβ42 in a fusion construct can be trapped in a stable oligomer state, which recapitulates characteristics of prefibrillar Aβ42 oligomers and enables us to establish their detailed structures. Site-directed spin labeling and electron paramagnetic resonance studies provide structural restraints in terms of side chain mobility and intermolecular distances at all 42 residue positions. Using these restraints and other biophysical data, we present a novel atomic-level oligomer model. In our model, each Aβ42 protein forms a single β-sheet with three β-strands in an antiparallel arrangement. Each β-sheet consists of four Aβ42 molecules in a head-to-tail arrangement. Four β-sheets are packed together in a face-to-back fashion. The stacking of identical segments between different β-sheets within an oligomer suggests that prefibrillar oligomers may interconvert with fibrils via strand rotation, wherein β-strands undergo an ∼90° rotation along the strand direction. This work provides insights into rational design of therapeutics targeting the process of interconversion between toxic oligomers and non-toxic fibrils.

Indexed as

Models, MolecularAlzheimer DiseaseAmyloid beta-PeptidesHumansPeptide FragmentsProtein Structure, SecondaryAmyloid beta-Peptidesamyloid beta-protein (1-42)Peptide FragmentsAlzheimer DiseaseAmyloidElectron Paramagnetic Resonance (EPR)Protein AggregationProtein StructureSpin Labeling

Identifiers

PMID25118290
PMCPMC4175361

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.