Evidence map›Paper›PMID 25118283›Full record

ArticleThe Journal of biological chemistry2014

A critical role of the C-terminal segment for allosteric inhibitor-induced aberrant multimerization of HIV-1 integrase.

Nikoloz Shkriabai, Venkatasubramanian Dharmarajan, Alison Slaughter, Jacques J Kessl, Ross C Larue, Lei Feng, James R Fuchs, Patrick R Griffin, Mamuka Kvaratskhelia

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
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  9. Article
  10. Structure and function of retroviral integrase.Nature reviews. Microbiology · 2022
    Review
  11. Article
  12. Article
  13. Article
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  15. Article
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  19. Article
  20. Retroviral DNA Integration.Chemical reviews · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Nikoloz ShkriabaiCenter for Retrovirus Research and College of Pharmacy, The Ohio State University, Columbus, Ohio 43210.
Venkatasubramanian DharmarajanDepartment of Molecular Therapeutics, The Scripps Research Institute, Jupiter, Florida 33458, and.
Alison SlaughterCenter for Retrovirus Research and College of Pharmacy, The Ohio State University, Columbus, Ohio 43210.
Jacques J KesslCenter for Retrovirus Research and College of Pharmacy, The Ohio State University, Columbus, Ohio 43210.
Ross C LarueCenter for Retrovirus Research and College of Pharmacy, The Ohio State University, Columbus, Ohio 43210.
Lei FengCenter for Retrovirus Research and College of Pharmacy, The Ohio State University, Columbus, Ohio 43210.
James R FuchsDivision of Medicinal Chemistry and Pharmacognosy, College of Pharmacy, The Ohio State University, Columbus, Ohio 43210.
Patrick R GriffinDepartment of Molecular Therapeutics, The Scripps Research Institute, Jupiter, Florida 33458, and.
Mamuka KvaratskheliaCenter for Retrovirus Research and College of Pharmacy, The Ohio State University, Columbus, Ohio 43210,. Electronic address: kvaratskhelia.1@osu.edu.
The Ohio State University · USScripps Research Institute · US

Funding

Project 9P50GM103368 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI ARNOLD, EDWARD · 2012 to 2016
$20.0M
Structure and function of HIV-1 integraseR01AI062520 · NIAID · UNIVERSITY OF COLORADO DENVER · PI KVARATSKHELIA, MAMUKA · 2006 to 2020
$5.3M
Multimeric HIV-1 Integrase InhibitorsR01AI110310 · NIAID · UNIVERSITY OF COLORADO DENVER · PI KVARATSKHELIA, MAMUKA · 2014 to 2018
$2.2M
Acquisition of a LTQ/Orbitrap MS to advance the study of protein dynamicsS10RR027270 · NCRR · SCRIPPS RESEARCH INSTITUTE, THE · PI GRIFFIN, PATRICK ROBERT · 2010 to 2010
$500k
Role of HIV-1 Integrase in the Late Stage of Viral ReplicationR21AI110270 · NIAID · OHIO STATE UNIVERSITY · PI KESSL, JACQUES J. · 2014 to 2015
$423k
NCRR NIH HHS S10 RR027270NIAID NIH HHS AI062520NIAID NIH HHS AI110270NIAID NIH HHS AI110310NIAID NIH HHS R01 AI062520NIAID NIH HHS R01 AI110310NIAID NIH HHS R21 AI110270NIGMS NIH HHS GM103368NIGMS NIH HHS P50 GM103368
6 · The paper itself

Abstract

Allosteric HIV-1 integrase (IN) inhibitors (ALLINIs) are a promising class of antiretroviral agents for clinical development. Although ALLINIs promote aberrant IN multimerization and inhibit IN interaction with its cellular cofactor LEDGF/p75 with comparable potencies in vitro, their primary mechanism of action in infected cells is through inducing aberrant multimerization of IN. Crystal structures have shown that ALLINIs bind at the IN catalytic core domain dimer interface and bridge two interacting subunits. However, how these interactions promote higher-order protein multimerization is not clear. Here, we used mass spectrometry-based protein footprinting to monitor surface topology changes in full-length WT and the drug-resistant A128T mutant INs in the presence of ALLINI-2. These experiments have identified protein-protein interactions that extend beyond the direct inhibitor binding site and which lead to aberrant multimerization of WT but not A128T IN. Specifically, we demonstrate that C-terminal residues Lys-264 and Lys-266 play an important role in the inhibitor induced aberrant multimerization of the WT protein. Our findings provide structural clues for exploiting IN multimerization as a new, attractive therapeutic target and are expected to facilitate development of improved inhibitors.

Indexed as

AcetatesAllosteric RegulationDrug Resistance, ViralHIV-1HIV IntegraseHIV Integrase InhibitorsHumansIndolesMutation, MissenseProtein BindingProtein MultimerizationAcetatesALLINI-2HIV IntegraseHIV Integrase InhibitorsIndolesp31 integrase protein, Human immunodeficiency virus 1Allosteric InhibitorsDrug ResistanceHIV IntegraseHuman Immunodeficiency Virus (HIV)IntegraseLentivirusMass Spectrometry (MS)PharmacologyProtein Multimerization

Identifiers

PMID25118283
PMCPMC4176244
OpenAlexW2042381294

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.