Evidence map›Paper›PMID 25118167›Full record

ArticleMucosal immunology2015

In vivo attenuation and genetic evolution of a ST247-SCCmecI MRSA clone after 13 years of pathogenic bronchopulmonary colonization in a patient with cystic fibrosis: implications of the innate immune response.

E López-Collazo, T Jurado, J de Dios Caballero, M Pérez-Vázquez, A Vindel, E Hernández-Jiménez, J Tamames, C Cubillos-Zapata, M Manrique, R Tobes and 4 more

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In one paragraph

Article in Mucosal immunology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Selection ofFrontiers in cellular and infection microbiology · 2022
    Article
  3. Pathogens (Basel, Switzerland) · 2021
    Review
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

E López-Collazo1] Department of Tumor Immunology, IdiPAZ, Madrid, Spain [2] Innate Inmmunity Group, IdiPAZ and University Hospital La Paz, Madrid, Spain.
T JuradoDepartment of Tumor Immunology, IdiPAZ, Madrid, Spain.
J de Dios CaballeroDepartment of Microbiology, University Hospital Ramón y Cajal and IRYCIS, Madrid, Spain.
M Pérez-VázquezDepartment of Microbial Community Modeling, National Biotechnology Center, CSIC, Madrid, Spain.
A VindelDepartment of Microbial Community Modeling, National Biotechnology Center, CSIC, Madrid, Spain.
E Hernández-JiménezDepartment of Tumor Immunology, IdiPAZ, Madrid, Spain.
J TamamesNational Microbiology Center, Instituto de Salud Carlos III, Majadahonda, Madrid, Spain.
C Cubillos-ZapataDepartment of Tumor Immunology, IdiPAZ, Madrid, Spain.
M ManriqueOh no sequences! Research group, Era7 Bioinformatics, Granada, Spain.
R TobesOh no sequences! Research group, Era7 Bioinformatics, Granada, Spain.
L MáizCystic Fibrosis Unit, University Hospital Ramón y Cajal, Madrid, Spain.
R Cantón1] National Microbiology Center, Instituto de Salud Carlos III, Majadahonda, Madrid, Spain [2] Cystic Fibrosis Unit, University Hospital Ramón y Cajal, Madrid, Spain [3] Spanish Network for the Research in Infectious Diseases (REIPI), Instituto de Salud Carlos III, Madrid, Spain.
F Baquero1] National Microbiology Center, Instituto de Salud Carlos III, Majadahonda, Madrid, Spain [2] CIBER en Epidemiología y Salud Pública (CIBERESP), Madrid, Spain.
R Del Campo1] National Microbiology Center, Instituto de Salud Carlos III, Majadahonda, Madrid, Spain [2] CIBER en Epidemiología y Salud Pública (CIBERESP), Madrid, Spain.
Hospital La Paz Institute for Health Research · ESInstituto de Salud Carlos III · ESCentro Nacional de Biotecnología · ESHospital Universitario Ramón y Cajal · ESInstituto Ramón y Cajal de Investigación Sanitaria · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Methicillin-resistant Staphylococcus aureus (MRSA) causes chronic pulmonary infections in patients with cystic fibrosis (CF). This study tracks the 13-year evolution (1996-2009) of a single MRSA clone in a male patient with CF, evaluating both the host immunogenic response and the microbial variations. Whole-genome sequencing was performed for the initial (CF-96) and evolved (CF-09) isolates. The immunogenicity of CF-96 and CF-09 was evaluated by incubation with innate immune cells from healthy volunteers. We also studied the patient's innate immune response profile, cytokine production, expression of triggering receptor expressed on myeloid cells-1 (TREM-1), and phagocytosis. A total of 30 MRSA ST247-SCCmecI-pvl(-) isolates were collected, which evidenced a genome size reduction from the CF-96 ancestor to the evolved CF-09 strain. Up to six changes in the spa-type were observed over the course of the 13-year evolution. Cytokine production, TREM-1 expression, and phagocytosis were significantly lower for the healthy volunteer monocytes exposed to CF-09, compared with those exposed to CF-96. Patient monocytes exhibited a reduced inflammatory response when challenged with CF-09. Genetic changes in MRSA, leading to reduced immunogenicity and entry into the refractory state, may contribute to the attenuation of virulence and efficient persistence of the bacteria in the CF lung.

Indexed as

Evolution, MolecularImmunity, InnateAnti-Bacterial AgentsChild, PreschoolComputational BiologyCystic FibrosisFollow-Up StudiesGene Expression ProfilingGenome, BacterialHigh-Throughput Nucleotide SequencingHumansMaleMethicillin-Resistant Staphylococcus aureusMicrobial Sensitivity TestsMonocytesPhagocytosisAnti-Bacterial AgentsTumor Necrosis Factor-alpha

Identifiers

PMID25118167
OpenAlexW4234589892

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.