Evidence map›Paper›PMID 25118165›Full record

ArticleMucosal immunology2015

A small intestinal organoid model of non-invasive enteric pathogen-epithelial cell interactions.

S S Wilson, A Tocchi, M K Holly, W C Parks, J G Smith

Open access · bronzeAbstract read
In one paragraph

Article in Mucosal immunology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed, 156 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Pharmaceuticals (Basel, Switzerland) · 2025
    Article
  5. Review
  6. Review
  7. Review
  8. Review
  9. Review
  10. Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. In Vitro Models for Investigating Intestinal Host-Pathogen Interactions.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Review
  16. Review
  17. Article
  18. In Vitro Porcine (Explant) Colon Culture.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  19. From intestine to beyond:Open biology · 2024
    Article
  20. Review

45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

S S WilsonDepartment of Microbiology, University of Washington, Seattle, Washington, USA.
A TocchiDepartment of Pathology, University of Washington, Seattle, Washington, USA.
M K HollyDepartment of Microbiology, University of Washington, Seattle, Washington, USA.
W C Parks1] Department of Pathology, University of Washington, Seattle, Washington, USA [2] Department of Medicine, University of Washington, Seattle, Washington, USA.
J G SmithDepartment of Microbiology, University of Washington, Seattle, Washington, USA.
University of Washington · US

Funding

TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
Thymic Stromal Lymphopoietin (TSLP) and Lung Inflammation and ImmP01HL098067 · NHLBI · BENAROYA RESEARCH INST AT VIRGINIA MASON · PI FREVERT, CHARLES WAYNE · 2010 to 2014
$13.5M
Anti-viral Mechanisms of DefensinsR01AI104920 · NIAID · UNIVERSITY OF WASHINGTON · PI MCKENNA, ROBERT, SMITH, JASON G · 2014 to 2023
$6.1M
Viral Pathogenesis Training ProgramT32AI083203 · NIAID · UNIVERSITY OF WASHINGTON · PI BLOOM, JESSE D, LAGUNOFF, MICHAEL · 2009 to 2023
$2.7M
Defensins in Innate Immunity to VirusesR56AI097311 · NIAID · UNIVERSITY OF WASHINGTON · PI SMITH, JASON G · 2012 to 2012
$299k
NHLBI NIH HHS HL098067NHLBI NIH HHS P01 HL098067NIAID NIH HHS R01 AI104920NIAID NIH HHS R56 AI097311NIAID NIH HHS T32 AI083203NIGMS NIH HHS T32 GM007270NIGMS NIH HHS T32 GM07270
6 · The paper itself

Abstract

Organoids mirror in vivo tissue organization and are powerful tools to investigate the development and cell biology of the small intestine. However, their application for the study of host-pathogen interactions has been largely unexplored. We have established a model using microinjection of organoids to mimic enteric infection, allowing for direct examination of pathogen interactions with primary epithelial cells in the absence of confounding variables introduced by immune cells or the commensal microbiota. We investigated the impact of Paneth cell α-defensin antimicrobial peptides on bacterial growth. We demonstrate that organoids form a sealed lumen, which contains concentrations of α-defensins capable of restricting growth of multiple strains of Salmonella enterica serovar Typhimurium for at least 20 h postinfection. Transgenic expression of human defensin 5 in mouse organoids lacking functional murine α-defensins partially restored bacterial killing. We also found that organoids from NOD2(-/-) mice were not impaired in α-defensin expression or antibacterial activity. This model is optimized for the study of non-invasive bacteria but can be extended to other enteric pathogens and is amenable to further genetic manipulation of both the host and microbe to dissect this critical interface of host defense.

Indexed as

alpha-DefensinsAnimalsBacterial ProteinsDefensinsGene Knockout TechniquesHost-Pathogen InteractionsHumansIntestinal MucosaIntestine, SmallMatrix Metalloproteinase 7MiceMice, KnockoutMutationNod2 Signaling Adaptor ProteinSalmonella typhimuriumalpha-DefensinsBacterial ProteinsDefensinsMatrix Metalloproteinase 7Nod2 Signaling Adaptor ProteinPhoP protein, Bacteria

Identifiers

PMID25118165
PMCPMC4326599
OpenAlexW1996629345

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.