Evidence map›Paper›PMID 25116351›Full record

ArticleCellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology2014

Krüppel -like factor 8 is a stress-responsive transcription factor that regulates expression of HuR.

Suman Govindaraju, Beth S Lee

Open access · goldAbstract read
In one paragraph

Article in Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Suman GovindarajuDepartment of Physiology and Cell Biology, The Ohio State University College of Medicine and Ohio State Biochemistry Program, Columbus, Ohio, USA.
Beth S Lee
The Ohio State University · US

Funding

TRANSCRIPTIONAL CONTROL OF VACUOLAR H+-ATPASE EXPRESSIONR01DK052131 · NIDDK · WASHINGTON UNIVERSITY · PI LEE, BETH S. · 1997 to 2009
$2.7M
NIDDK NIH HHS NIH R01 DK052131NIDDK NIH HHS NIH R01 DK052131-S1NIDDK NIH HHS R01 DK052131
6 · The paper itself

Abstract

BACKGROUND/

aimsHuR is an RNA-binding protein that regulates the post-transcriptional life of thousands of cellular mRNAs and promotes cell survival. HuR is expressed as two mRNA transcripts that are differentially regulated by cell stress. The goal of this study is to define factors that promote transcription of the longer alternate form.

methodsEffects of transcription factors on HuR expression were determined by inhibition or overexpression of these factors followed by competitive RT-PCR, gel mobility shift, and chromatin immunoprecipitation. Transcription factor expression patterns were identified through competitive RT-PCR and Western analysis. Stress responses were assayed in thapsigargin-treated proximal tubule cells and in ischemic rat kidney.

resultsA previously described NF-κB site and a newly identified Sp/KLF factor binding site were shown to be important for transcription of the long HuR mRNA. KLF8, but not Sp1, was shown to bind this site and increase HuR mRNA levels. Cellular stress in cultured or native proximal tubule cells resulted in a rapid decrease of KLF8 levels that paralleled those of the long HuR mRNA variant.

conclusionsThese results demonstrate that KLF8 can participate in regulating expression of alternate forms of HuR mRNA along with NF-κB and other factors, depending on cellular contexts.

Indexed as

AnimalsBase SequenceBlotting, WesternChromatin ImmunoprecipitationDNA PrimersELAV ProteinsKidney Tubules, ProximalLLC-PK1 CellsPolymerase Chain ReactionRatsRepressor ProteinsRNA, MessengerSwineDNA PrimersELAV ProteinsRepressor ProteinsRNA, Messenger

Identifiers

PMID25116351
PMCPMC4151249
OpenAlexW2087026845

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.